Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 AC064862.7-201ENST00000604520 867 ntBASIC31.7■■■□□ 2.67
TRIM41Q8WV44 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC31.7■■■□□ 2.67
TRIM41Q8WV44 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.66
TRIM41Q8WV44 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC31.7■■■□□ 2.66
TRIM41Q8WV44 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
TRIM41Q8WV44 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
TRIM41Q8WV44 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
TRIM41Q8WV44 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
TRIM41Q8WV44 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC31.7■■■□□ 2.66
TRIM41Q8WV44 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
TRIM41Q8WV44 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
TRIM41Q8WV44 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 CYMP-203ENST00000474680 1263 ntBASIC31.69■■■□□ 2.66
TRIM41Q8WV44 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC31.69■■■□□ 2.66
TRIM41Q8WV44 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 WDR53-203ENST00000429115 683 ntTSL 2 BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 TPM1-218ENST00000559281 851 ntTSL 5 BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 PIN1-206ENST00000587625 878 ntTSL 2 BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC31.68■■■□□ 2.66
TRIM41Q8WV44 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
TRIM41Q8WV44 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
TRIM41Q8WV44 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC31.67■■■□□ 2.66
TRIM41Q8WV44 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
TRIM41Q8WV44 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC31.67■■■□□ 2.66
TRIM41Q8WV44 HES2-202ENST00000377836 507 ntTSL 2 BASIC31.67■■■□□ 2.66
TRIM41Q8WV44 RPSAP43-201ENST00000402237 625 ntBASIC31.67■■■□□ 2.66
TRIM41Q8WV44 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC31.67■■■□□ 2.66
TRIM41Q8WV44 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TRIM41Q8WV44 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
TRIM41Q8WV44 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
TRIM41Q8WV44 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
TRIM41Q8WV44 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 LINC00265-3P-201ENST00000447588 903 ntBASIC31.66■■■□□ 2.66
TRIM41Q8WV44 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 AL773604.1-201ENST00000617417 272 ntBASIC31.66■■■□□ 2.66
TRIM41Q8WV44 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TRIM41Q8WV44 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 DHDH-204ENST00000523250 634 ntTSL 5 BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 AC068587.9-201ENST00000641814 219 ntBASIC31.65■■■□□ 2.66
TRIM41Q8WV44 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
TRIM41Q8WV44 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC31.65■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms