Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 RARRES2P6-201ENST00000567333 442 ntBASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 MYC-208ENST00000641036 567 ntBASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 AC008556.1-201ENST00000610908 2040 ntBASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.95■□□□□ 0.3
CNIH3Q8TBE1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 AC022211.2-201ENST00000585075 2527 ntBASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 AC112777.1-201ENST00000540175 1423 ntBASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNIH3Q8TBE1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 FLJ13224-201ENST00000313737 1514 ntBASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 AC006015.1-201ENST00000429970 570 ntBASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CNIH3Q8TBE1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms