Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 HMGN1P19-201ENST00000436976 333 ntBASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 AL591684.3-201ENST00000605187 298 ntBASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 MIR7706-201ENST00000613747 67 ntBASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.45■□□□□ 0.38
SNIP1Q8TAD8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 AC091607.1-201ENST00000490318 1060 ntBASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 AC011840.4-201ENST00000578471 627 ntBASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 AC024563.2-201ENST00000603282 481 ntBASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 AL691403.2-201ENST00000618460 490 ntBASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
SNIP1Q8TAD8 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 AC008608.2-201ENST00000606089 416 ntBASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 SDHAP1-207ENST00000440850 2000 ntBASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNIP1Q8TAD8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNIP1Q8TAD8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms