Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.77■□□□□ 0.11
CLDND2Q8NHS1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 AP000550.4-202ENST00000639755 178 ntBASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLDND2Q8NHS1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 AL390961.4-201ENST00000623958 2535 ntBASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 PCDHB18P-201ENST00000524813 2368 ntBASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 FAM86EP-206ENST00000510506 987 ntBASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 GCSHP2-201ENST00000560971 527 ntBASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 AL032819.2-201ENST00000624543 2162 ntBASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDND2Q8NHS1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDND2Q8NHS1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms