Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 AC068472.1-201ENST00000474589 881 ntBASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 AC004449.1-201ENST00000564240 433 ntBASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 AC006557.2-201ENST00000592985 1240 ntBASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
LTBP4Q8N2S1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LTBP4Q8N2S1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
LTBP4Q8N2S1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC25.68■■□□□ 1.7
LTBP4Q8N2S1 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
LTBP4Q8N2S1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC25.68■■□□□ 1.7
LTBP4Q8N2S1 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
LTBP4Q8N2S1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
LTBP4Q8N2S1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC25.68■■□□□ 1.7
LTBP4Q8N2S1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 NMU-203ENST00000507338 658 ntTSL 3 BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 AC093520.2-201ENST00000561830 333 ntBASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC25.67■■□□□ 1.7
LTBP4Q8N2S1 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LTBP4Q8N2S1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC25.65■■□□□ 1.7
LTBP4Q8N2S1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LTBP4Q8N2S1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC25.65■■□□□ 1.7
LTBP4Q8N2S1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LTBP4Q8N2S1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
LTBP4Q8N2S1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LTBP4Q8N2S1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LTBP4Q8N2S1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC25.65■■□□□ 1.7
LTBP4Q8N2S1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC25.65■■□□□ 1.7
LTBP4Q8N2S1 AL359881.2-201ENST00000602973 570 ntBASIC25.65■■□□□ 1.7
LTBP4Q8N2S1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC25.65■■□□□ 1.7
LTBP4Q8N2S1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC25.65■■□□□ 1.7
LTBP4Q8N2S1 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.65■■□□□ 1.7
LTBP4Q8N2S1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 HLA-DRB6-201ENST00000411500 1235 ntBASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 TERF1P3-201ENST00000505638 1227 ntBASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 AC093214.1-201ENST00000511688 1107 ntBASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 RN7SL204P-201ENST00000582831 262 ntBASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC25.64■■□□□ 1.7
LTBP4Q8N2S1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LTBP4Q8N2S1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC25.64■■□□□ 1.69
LTBP4Q8N2S1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LTBP4Q8N2S1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.64■■□□□ 1.69
LTBP4Q8N2S1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LTBP4Q8N2S1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC25.63■■□□□ 1.69
LTBP4Q8N2S1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LTBP4Q8N2S1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms