Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.95■□□□□ 0.62
SIX5Q8N196 AC024563.2-201ENST00000603282 481 ntBASIC18.95■□□□□ 0.62
SIX5Q8N196 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX5Q8N196 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIX5Q8N196 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX5Q8N196 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX5Q8N196 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.95■□□□□ 0.62
SIX5Q8N196 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX5Q8N196 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX5Q8N196 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIX5Q8N196 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.95■□□□□ 0.62
SIX5Q8N196 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIX5Q8N196 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.94■□□□□ 0.62
SIX5Q8N196 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.94■□□□□ 0.62
SIX5Q8N196 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SIX5Q8N196 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.94■□□□□ 0.62
SIX5Q8N196 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.94■□□□□ 0.62
SIX5Q8N196 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 POM121L3P-201ENST00000419331 1163 ntBASIC18.94■□□□□ 0.62
SIX5Q8N196 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.94■□□□□ 0.62
SIX5Q8N196 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 AC073648.2-201ENST00000510116 352 ntBASIC18.94■□□□□ 0.62
SIX5Q8N196 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.94■□□□□ 0.62
SIX5Q8N196 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.94■□□□□ 0.62
SIX5Q8N196 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.94■□□□□ 0.62
SIX5Q8N196 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SIX5Q8N196 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.94■□□□□ 0.62
SIX5Q8N196 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.94■□□□□ 0.62
SIX5Q8N196 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.94■□□□□ 0.62
SIX5Q8N196 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SIX5Q8N196 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SIX5Q8N196 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.94■□□□□ 0.62
SIX5Q8N196 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.94■□□□□ 0.62
SIX5Q8N196 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SIX5Q8N196 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIX5Q8N196 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.93■□□□□ 0.62
SIX5Q8N196 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SIX5Q8N196 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.93■□□□□ 0.62
SIX5Q8N196 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.93■□□□□ 0.62
SIX5Q8N196 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.93■□□□□ 0.62
SIX5Q8N196 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.93■□□□□ 0.62
SIX5Q8N196 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.93■□□□□ 0.62
SIX5Q8N196 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.93■□□□□ 0.62
SIX5Q8N196 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.93■□□□□ 0.62
SIX5Q8N196 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SIX5Q8N196 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 AL162377.1-201ENST00000618844 1793 ntBASIC18.93■□□□□ 0.62
SIX5Q8N196 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.93■□□□□ 0.62
SIX5Q8N196 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.93■□□□□ 0.62
SIX5Q8N196 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIX5Q8N196 AL353692.3-201ENST00000407031 1396 ntBASIC18.93■□□□□ 0.62
SIX5Q8N196 ZNF259P1-201ENST00000407656 1365 ntBASIC18.93■□□□□ 0.62
SIX5Q8N196 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
SIX5Q8N196 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
SIX5Q8N196 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX5Q8N196 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.92■□□□□ 0.62
SIX5Q8N196 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SIX5Q8N196 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SIX5Q8N196 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX5Q8N196 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX5Q8N196 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SIX5Q8N196 AL512353.2-201ENST00000448759 1962 ntBASIC18.92■□□□□ 0.62
SIX5Q8N196 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX5Q8N196 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX5Q8N196 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX5Q8N196 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SIX5Q8N196 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIX5Q8N196 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SIX5Q8N196 AC005104.2-201ENST00000427818 678 ntBASIC18.92■□□□□ 0.62
SIX5Q8N196 AC139887.3-201ENST00000568585 713 ntBASIC18.92■□□□□ 0.62
SIX5Q8N196 MIR5100-201ENST00000579544 119 ntBASIC18.92■□□□□ 0.62
SIX5Q8N196 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.92■□□□□ 0.62
SIX5Q8N196 AL049840.3-201ENST00000602669 611 ntBASIC18.92■□□□□ 0.62
SIX5Q8N196 AC008608.2-201ENST00000606089 416 ntBASIC18.92■□□□□ 0.62
SIX5Q8N196 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SIX5Q8N196 AL691403.2-201ENST00000618460 490 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms