Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRTM4Q86VH4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRRTM4Q86VH4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRTM4Q86VH4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRTM4Q86VH4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRTM4Q86VH4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRTM4Q86VH4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
LRRTM4Q86VH4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
LRRTM4Q86VH4 HYMAI.1-201ENST00000620949 238 ntBASIC18.19■□□□□ 0.5
LRRTM4Q86VH4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRTM4Q86VH4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRTM4Q86VH4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRTM4Q86VH4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 AL121956.5-201ENST00000625261 221 ntBASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRTM4Q86VH4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 HBZP1-201ENST00000354915 429 ntBASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 AC092597.1-201ENST00000487352 616 ntBASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 AC083849.1-201ENST00000615227 514 ntBASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 AL163051.1-201ENST00000569214 1512 ntBASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 AL031598.1-201ENST00000561511 1773 ntBASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 MYLKP1-201ENST00000509077 1580 ntBASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRTM4Q86VH4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 AC087289.5-201ENST00000586076 3175 ntBASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 ZNF444P1-201ENST00000559497 298 ntBASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 AL136038.4-201ENST00000603606 1261 ntBASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRTM4Q86VH4 AL499627.1-201ENST00000569373 2188 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms