Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.53■□□□□ 0.56
LDB1Q86U70 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.53■□□□□ 0.56
LDB1Q86U70 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LDB1Q86U70 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LDB1Q86U70 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.53■□□□□ 0.56
LDB1Q86U70 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LDB1Q86U70 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LDB1Q86U70 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LDB1Q86U70 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LDB1Q86U70 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LDB1Q86U70 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LDB1Q86U70 AC092338.2-201ENST00000568827 1415 ntBASIC18.52■□□□□ 0.56
LDB1Q86U70 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LDB1Q86U70 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
LDB1Q86U70 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.52■□□□□ 0.56
LDB1Q86U70 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LDB1Q86U70 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.52■□□□□ 0.56
LDB1Q86U70 SLC25A1P2-201ENST00000430693 912 ntBASIC18.52■□□□□ 0.56
LDB1Q86U70 AC007663.1-201ENST00000438948 1240 ntBASIC18.52■□□□□ 0.56
LDB1Q86U70 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.52■□□□□ 0.56
LDB1Q86U70 AC010947.1-201ENST00000623454 693 ntBASIC18.52■□□□□ 0.56
LDB1Q86U70 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LDB1Q86U70 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LDB1Q86U70 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LDB1Q86U70 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LDB1Q86U70 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.52■□□□□ 0.56
LDB1Q86U70 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LDB1Q86U70 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 BICD1-207ENST00000551848 1962 ntBASIC18.51■□□□□ 0.55
LDB1Q86U70 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.51■□□□□ 0.55
LDB1Q86U70 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.51■□□□□ 0.55
LDB1Q86U70 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.51■□□□□ 0.55
LDB1Q86U70 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LDB1Q86U70 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.51■□□□□ 0.55
LDB1Q86U70 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.51■□□□□ 0.55
LDB1Q86U70 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.51■□□□□ 0.55
LDB1Q86U70 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LDB1Q86U70 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LDB1Q86U70 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LDB1Q86U70 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LDB1Q86U70 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LDB1Q86U70 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.5■□□□□ 0.55
LDB1Q86U70 AC112777.1-201ENST00000540175 1423 ntBASIC18.5■□□□□ 0.55
LDB1Q86U70 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LDB1Q86U70 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.5■□□□□ 0.55
LDB1Q86U70 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LDB1Q86U70 MMP23A-201ENST00000234610 1017 ntBASIC18.5■□□□□ 0.55
LDB1Q86U70 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.5■□□□□ 0.55
LDB1Q86U70 TSPY17P-201ENST00000450329 467 ntBASIC18.5■□□□□ 0.55
LDB1Q86U70 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LDB1Q86U70 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.5■□□□□ 0.55
LDB1Q86U70 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.5■□□□□ 0.55
LDB1Q86U70 C2orf69P3-201ENST00000565542 1120 ntBASIC18.5■□□□□ 0.55
LDB1Q86U70 MIR3180-5-201ENST00000583743 153 ntBASIC18.5■□□□□ 0.55
LDB1Q86U70 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LDB1Q86U70 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.5■□□□□ 0.55
LDB1Q86U70 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LDB1Q86U70 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LDB1Q86U70 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LDB1Q86U70 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LDB1Q86U70 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
LDB1Q86U70 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LDB1Q86U70 AL390961.4-201ENST00000623958 2535 ntBASIC18.5■□□□□ 0.55
LDB1Q86U70 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.49■□□□□ 0.55
LDB1Q86U70 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LDB1Q86U70 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LDB1Q86U70 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.49■□□□□ 0.55
LDB1Q86U70 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
LDB1Q86U70 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LDB1Q86U70 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.49■□□□□ 0.55
LDB1Q86U70 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms