Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
VPS13CQ709C8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.44■□□□□ 0.06
VPS13CQ709C8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 AF186996.4-201ENST00000467186 377 ntBASIC15.43■□□□□ 0.06
VPS13CQ709C8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 AL591684.3-201ENST00000605187 298 ntBASIC15.43■□□□□ 0.06
VPS13CQ709C8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VPS13CQ709C8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.43■□□□□ 0.06
VPS13CQ709C8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13CQ709C8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13CQ709C8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.42■□□□□ 0.06
VPS13CQ709C8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.42■□□□□ 0.06
VPS13CQ709C8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.42■□□□□ 0.06
VPS13CQ709C8 AC211486.1-202ENST00000416371 468 ntBASIC15.42■□□□□ 0.06
VPS13CQ709C8 AC211476.1-201ENST00000503899 468 ntBASIC15.42■□□□□ 0.06
VPS13CQ709C8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
VPS13CQ709C8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13CQ709C8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13CQ709C8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
VPS13CQ709C8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13CQ709C8 GABARAPL3-202ENST00000624044 1851 ntBASIC15.42■□□□□ 0.06
VPS13CQ709C8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13CQ709C8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13CQ709C8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13CQ709C8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
VPS13CQ709C8 POM121L3P-201ENST00000419331 1163 ntBASIC15.42■□□□□ 0.06
VPS13CQ709C8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.42■□□□□ 0.06
VPS13CQ709C8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13CQ709C8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.42■□□□□ 0.06
VPS13CQ709C8 AC140113.2-201ENST00000604370 208 ntBASIC15.42■□□□□ 0.06
VPS13CQ709C8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13CQ709C8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13CQ709C8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
VPS13CQ709C8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
VPS13CQ709C8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VPS13CQ709C8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 FGFR3P6-201ENST00000457012 610 ntBASIC15.41■□□□□ 0.06
VPS13CQ709C8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13CQ709C8 RCC2P3-201ENST00000418112 1537 ntBASIC15.41■□□□□ 0.06
VPS13CQ709C8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13CQ709C8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13CQ709C8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13CQ709C8 MED15P5-201ENST00000423150 992 ntBASIC15.41■□□□□ 0.06
VPS13CQ709C8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 AC008608.2-201ENST00000606089 416 ntBASIC15.41■□□□□ 0.06
VPS13CQ709C8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VPS13CQ709C8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.41■□□□□ 0.06
VPS13CQ709C8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VPS13CQ709C8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.4■□□□□ 0.06
VPS13CQ709C8 AC132008.2-207ENST00000454517 770 ntBASIC15.4■□□□□ 0.06
VPS13CQ709C8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.4■□□□□ 0.06
VPS13CQ709C8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.4■□□□□ 0.06
VPS13CQ709C8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.4■□□□□ 0.06
VPS13CQ709C8 AC025062.2-201ENST00000605477 670 ntBASIC15.4■□□□□ 0.06
VPS13CQ709C8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.4■□□□□ 0.06
VPS13CQ709C8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.4■□□□□ 0.06
VPS13CQ709C8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
VPS13CQ709C8 AL691403.2-201ENST00000618460 490 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms