Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXR2Q6PJQ5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
FOXR2Q6PJQ5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 AC068880.1-201ENST00000507289 2297 ntBASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 MIR1238-201ENST00000408483 83 ntBASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 MIR4497-201ENST00000583208 89 ntBASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXR2Q6PJQ5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 AL390955.1-201ENST00000428694 934 ntBASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 SNORA78-201ENST00000459373 127 ntBASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 AC112497.1-201ENST00000624824 639 ntBASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 AL096828.2-201ENST00000567259 1965 ntBASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXR2Q6PJQ5 AC093010.1-201ENST00000473625 1624 ntBASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.16■□□□□ 0.82
FOXR2Q6PJQ5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR2Q6PJQ5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR2Q6PJQ5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR2Q6PJQ5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR2Q6PJQ5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.15■□□□□ 0.82
FOXR2Q6PJQ5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
FOXR2Q6PJQ5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FOXR2Q6PJQ5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.15■□□□□ 0.82
FOXR2Q6PJQ5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXR2Q6PJQ5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXR2Q6PJQ5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.15■□□□□ 0.82
FOXR2Q6PJQ5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.15■□□□□ 0.82
FOXR2Q6PJQ5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms