Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
REEP3Q6NUK4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
REEP3Q6NUK4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.32■□□□□ 0.36
REEP3Q6NUK4 AC008556.1-201ENST00000610908 2040 ntBASIC17.31■□□□□ 0.36
REEP3Q6NUK4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 MIR4651-201ENST00000582622 73 ntBASIC17.31■□□□□ 0.36
REEP3Q6NUK4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 AP000692.2-201ENST00000608391 879 ntBASIC17.31■□□□□ 0.36
REEP3Q6NUK4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 AC093677.2-201ENST00000600169 1863 ntBASIC17.31■□□□□ 0.36
REEP3Q6NUK4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
REEP3Q6NUK4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 FAM197Y4-202ENST00000622692 608 ntBASIC17.3■□□□□ 0.36
REEP3Q6NUK4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 PCDHB18P-201ENST00000524813 2368 ntBASIC17.3■□□□□ 0.36
REEP3Q6NUK4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
REEP3Q6NUK4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 AL135905.2-201ENST00000584934 1404 ntBASIC17.29■□□□□ 0.36
REEP3Q6NUK4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
REEP3Q6NUK4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 AP000593.1-201ENST00000393668 712 ntBASIC17.28■□□□□ 0.36
REEP3Q6NUK4 MESTP1-201ENST00000404287 994 ntBASIC17.28■□□□□ 0.36
REEP3Q6NUK4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 AC008622.2-201ENST00000617006 1229 ntBASIC17.28■□□□□ 0.36
REEP3Q6NUK4 AL359736.2-201ENST00000621992 437 ntBASIC17.28■□□□□ 0.36
REEP3Q6NUK4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
REEP3Q6NUK4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms