Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRK2Q5S007 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRK2Q5S007 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRK2Q5S007 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRK2Q5S007 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRK2Q5S007 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRK2Q5S007 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRK2Q5S007 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRK2Q5S007 GAPDHP21-201ENST00000450301 1010 ntBASIC16.03■□□□□ 0.16
LRRK2Q5S007 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRK2Q5S007 AL512353.2-201ENST00000448759 1962 ntBASIC16.03■□□□□ 0.16
LRRK2Q5S007 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 INTS4P1-201ENST00000438455 1935 ntBASIC16.03■□□□□ 0.16
LRRK2Q5S007 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRK2Q5S007 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRK2Q5S007 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 MIR6752-201ENST00000618442 71 ntBASIC16.03■□□□□ 0.16
LRRK2Q5S007 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 AC092865.6-201ENST00000642101 219 ntBASIC16.03■□□□□ 0.16
LRRK2Q5S007 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRK2Q5S007 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRK2Q5S007 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRK2Q5S007 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRK2Q5S007 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRK2Q5S007 AC063926.2-201ENST00000623766 1308 ntBASIC16.02■□□□□ 0.16
LRRK2Q5S007 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRK2Q5S007 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRK2Q5S007 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRK2Q5S007 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRK2Q5S007 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRK2Q5S007 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRK2Q5S007 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRK2Q5S007 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRK2Q5S007 AC092910.1-201ENST00000482027 1129 ntBASIC16.02■□□□□ 0.16
LRRK2Q5S007 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRK2Q5S007 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRK2Q5S007 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.02■□□□□ 0.16
LRRK2Q5S007 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.02■□□□□ 0.16
LRRK2Q5S007 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRK2Q5S007 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRK2Q5S007 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRRK2Q5S007 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.02■□□□□ 0.16
LRRK2Q5S007 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.02■□□□□ 0.15
LRRK2Q5S007 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.02■□□□□ 0.15
LRRK2Q5S007 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.02■□□□□ 0.15
LRRK2Q5S007 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRRK2Q5S007 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
LRRK2Q5S007 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.02■□□□□ 0.15
LRRK2Q5S007 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
LRRK2Q5S007 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
LRRK2Q5S007 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.02■□□□□ 0.15
LRRK2Q5S007 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.02■□□□□ 0.15
LRRK2Q5S007 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRRK2Q5S007 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.02■□□□□ 0.15
LRRK2Q5S007 TSEN15P1-201ENST00000423257 515 ntBASIC16.02■□□□□ 0.15
LRRK2Q5S007 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.02■□□□□ 0.15
LRRK2Q5S007 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRRK2Q5S007 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.02■□□□□ 0.15
LRRK2Q5S007 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.02■□□□□ 0.15
LRRK2Q5S007 AC112777.1-201ENST00000540175 1423 ntBASIC16.02■□□□□ 0.15
LRRK2Q5S007 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.15
LRRK2Q5S007 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRK2Q5S007 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRK2Q5S007 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRK2Q5S007 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 AC015922.1-201ENST00000421102 1152 ntBASIC16.01■□□□□ 0.15
LRRK2Q5S007 MEIS3P1-201ENST00000495167 958 ntBASIC16.01■□□□□ 0.15
LRRK2Q5S007 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRK2Q5S007 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRK2Q5S007 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRK2Q5S007 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRK2Q5S007 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRK2Q5S007 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRK2Q5S007 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRK2Q5S007 ELL2P1-201ENST00000413990 1906 ntBASIC16.01■□□□□ 0.15
LRRK2Q5S007 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms