Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 AC004951.3-201ENST00000418645 1148 ntBASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 RPS2P4-201ENST00000476944 856 ntBASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 RNA5SP413-201ENST00000516373 109 ntBASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 AC124016.1-201ENST00000609552 612 ntBASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 AC110285.5-201ENST00000611501 352 ntBASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 GNAS-203ENST00000306120 1878 ntBASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RUNDC3AQ59EK9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 AL355802.2-201ENST00000402069 882 ntBASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 AL353708.3-201ENST00000610272 989 ntBASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 BCL2-203ENST00000589955 5011 ntBASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RUNDC3AQ59EK9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 CKBP1-201ENST00000565489 1086 ntBASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 LINC00896-202ENST00000609602 2128 ntBASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.52■□□□□ 0.4
RUNDC3AQ59EK9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RUNDC3AQ59EK9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
RUNDC3AQ59EK9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RUNDC3AQ59EK9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RUNDC3AQ59EK9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 REXO1L9P-201ENST00000604264 2108 ntBASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 KSR1P1-201ENST00000446298 240 ntBASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
RUNDC3AQ59EK9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms