Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 FEM1AP3-201ENST00000403722 1741 ntBASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 AL023803.3-201ENST00000615559 522 ntBASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 AC097493.4-201ENST00000641197 219 ntBASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 FP475955.4-201ENST00000623131 1990 ntBASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.78■□□□□ 0.6
KHDC1Q4VXA5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 TSPY14P-201ENST00000303979 915 ntBASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 C2orf69P3-201ENST00000565542 1120 ntBASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 LINC01568-207ENST00000641790 1380 ntBASIC18.77■□□□□ 0.6
KHDC1Q4VXA5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.77■□□□□ 0.59
KHDC1Q4VXA5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
KHDC1Q4VXA5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
KHDC1Q4VXA5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 AC145285.6-201ENST00000604632 637 ntBASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
KHDC1Q4VXA5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 ECEL1P2-202ENST00000465689 757 ntBASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 EGLN1P1-201ENST00000531623 762 ntBASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 AC008622.2-201ENST00000617006 1229 ntBASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.75■□□□□ 0.59
KHDC1Q4VXA5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms