Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 AC128688.1-201ENST00000487626 519 ntBASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 AC006011.2-201ENST00000621313 1158 ntBASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 AL390961.4-201ENST00000623958 2535 ntBASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 Z98044.1-201ENST00000632503 1764 ntBASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CHRFAM7AQ494W8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 AL358472.4-201ENST00000633140 710 ntBASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 AL031985.4-201ENST00000642138 673 ntBASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHRFAM7AQ494W8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 BX664615.1-201ENST00000443558 458 ntBASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 EGLN1P1-201ENST00000531623 762 ntBASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 AC135050.7-201ENST00000624508 2218 ntBASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHRFAM7AQ494W8 FSCN1P1-201ENST00000568912 1481 ntBASIC16.22■□□□□ 0.19
CHRFAM7AQ494W8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHRFAM7AQ494W8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CHRFAM7AQ494W8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHRFAM7AQ494W8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.22■□□□□ 0.19
CHRFAM7AQ494W8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHRFAM7AQ494W8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms