Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.71■□□□□ 0.75
USP41Q3LFD5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.71■□□□□ 0.75
USP41Q3LFD5 GPR32P1-201ENST00000601788 811 ntBASIC19.71■□□□□ 0.75
USP41Q3LFD5 AC024563.2-201ENST00000603282 481 ntBASIC19.71■□□□□ 0.75
USP41Q3LFD5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.71■□□□□ 0.75
USP41Q3LFD5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP41Q3LFD5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
USP41Q3LFD5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP41Q3LFD5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP41Q3LFD5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
USP41Q3LFD5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
USP41Q3LFD5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
USP41Q3LFD5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.71■□□□□ 0.75
USP41Q3LFD5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
USP41Q3LFD5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP41Q3LFD5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP41Q3LFD5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP41Q3LFD5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP41Q3LFD5 AL357033.4-201ENST00000617703 1807 ntBASIC19.7■□□□□ 0.74
USP41Q3LFD5 AC004870.1-201ENST00000315132 882 ntBASIC19.7■□□□□ 0.74
USP41Q3LFD5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP41Q3LFD5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP41Q3LFD5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 TOB2P1-201ENST00000469761 992 ntBASIC19.7■□□□□ 0.74
USP41Q3LFD5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP41Q3LFD5 AC012615.1-201ENST00000565797 1299 ntBASIC19.7■□□□□ 0.74
USP41Q3LFD5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 IGHV3-41-201ENST00000613121 348 ntBASIC19.7■□□□□ 0.74
USP41Q3LFD5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP41Q3LFD5 AC018445.3-201ENST00000624177 1945 ntBASIC19.7■□□□□ 0.74
USP41Q3LFD5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP41Q3LFD5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
USP41Q3LFD5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP41Q3LFD5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
USP41Q3LFD5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
USP41Q3LFD5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP41Q3LFD5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP41Q3LFD5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP41Q3LFD5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP41Q3LFD5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.69■□□□□ 0.74
USP41Q3LFD5 AC093484.2-201ENST00000580996 2166 ntBASIC19.69■□□□□ 0.74
USP41Q3LFD5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP41Q3LFD5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP41Q3LFD5 IGHGP-201ENST00000390555 1178 ntBASIC19.69■□□□□ 0.74
USP41Q3LFD5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.69■□□□□ 0.74
USP41Q3LFD5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.69■□□□□ 0.74
USP41Q3LFD5 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.69■□□□□ 0.74
USP41Q3LFD5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.69■□□□□ 0.74
USP41Q3LFD5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.69■□□□□ 0.74
USP41Q3LFD5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
USP41Q3LFD5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.69■□□□□ 0.74
USP41Q3LFD5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
USP41Q3LFD5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
USP41Q3LFD5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
USP41Q3LFD5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
USP41Q3LFD5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP41Q3LFD5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.69■□□□□ 0.74
USP41Q3LFD5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
USP41Q3LFD5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.69■□□□□ 0.74
USP41Q3LFD5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP41Q3LFD5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP41Q3LFD5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP41Q3LFD5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP41Q3LFD5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP41Q3LFD5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP41Q3LFD5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP41Q3LFD5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP41Q3LFD5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 AL845331.1-201ENST00000424978 1190 ntBASIC19.68■□□□□ 0.74
USP41Q3LFD5 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 UNC93B7-201ENST00000509439 705 ntBASIC19.68■□□□□ 0.74
USP41Q3LFD5 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP41Q3LFD5 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP41Q3LFD5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP41Q3LFD5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP41Q3LFD5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
USP41Q3LFD5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms