Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.97■□□□□ 0.47
HLA-BQ31612 AC148477.8-201ENST00000624298 468 ntBASIC17.97■□□□□ 0.47
HLA-BQ31612 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HLA-BQ31612 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-BQ31612 LINC01521-201ENST00000504184 1943 ntBASIC17.97■□□□□ 0.47
HLA-BQ31612 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-BQ31612 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.97■□□□□ 0.47
HLA-BQ31612 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HLA-BQ31612 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-BQ31612 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-BQ31612 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-BQ31612 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-BQ31612 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-BQ31612 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-BQ31612 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-BQ31612 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-BQ31612 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-BQ31612 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HLA-BQ31612 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-BQ31612 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-BQ31612 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.96■□□□□ 0.47
HLA-BQ31612 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-BQ31612 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.96■□□□□ 0.47
HLA-BQ31612 AC132008.2-207ENST00000454517 770 ntBASIC17.96■□□□□ 0.47
HLA-BQ31612 AC093909.1-201ENST00000504731 1122 ntBASIC17.96■□□□□ 0.47
HLA-BQ31612 AC114341.1-201ENST00000618070 349 ntBASIC17.96■□□□□ 0.47
HLA-BQ31612 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
HLA-BQ31612 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-BQ31612 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-BQ31612 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HLA-BQ31612 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
HLA-BQ31612 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-BQ31612 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HLA-BQ31612 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
HLA-BQ31612 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HLA-BQ31612 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HLA-BQ31612 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
HLA-BQ31612 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HLA-BQ31612 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HLA-BQ31612 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HLA-BQ31612 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HLA-BQ31612 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-BQ31612 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-BQ31612 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-BQ31612 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HLA-BQ31612 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-BQ31612 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-BQ31612 AL163051.1-201ENST00000569214 1512 ntBASIC17.95■□□□□ 0.46
HLA-BQ31612 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-BQ31612 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-BQ31612 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-BQ31612 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-BQ31612 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-BQ31612 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-BQ31612 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-BQ31612 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-BQ31612 AC008608.2-201ENST00000606089 416 ntBASIC17.95■□□□□ 0.46
HLA-BQ31612 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-BQ31612 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-BQ31612 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-BQ31612 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-BQ31612 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-BQ31612 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HLA-BQ31612 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-BQ31612 PCDHAC2-203ENST00000615316 3011 ntBASIC17.95■□□□□ 0.46
HLA-BQ31612 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HLA-BQ31612 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HLA-BQ31612 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-BQ31612 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-BQ31612 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
HLA-BQ31612 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-BQ31612 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-BQ31612 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-BQ31612 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-BQ31612 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.94■□□□□ 0.46
HLA-BQ31612 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-BQ31612 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
HLA-BQ31612 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-BQ31612 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-BQ31612 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-BQ31612 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HLA-BQ31612 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-BQ31612 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-BQ31612 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-BQ31612 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-BQ31612 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.94■□□□□ 0.46
HLA-BQ31612 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-BQ31612 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-BQ31612 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-BQ31612 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-BQ31612 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
HLA-BQ31612 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-BQ31612 KRT18P58-201ENST00000527480 1120 ntBASIC17.94■□□□□ 0.46
HLA-BQ31612 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.94■□□□□ 0.46
HLA-BQ31612 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-BQ31612 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HLA-BQ31612 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-BQ31612 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-BQ31612 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.94■□□□□ 0.46
HLA-BQ31612 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms