Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.58■□□□□ 0.24
H3F3AP84243 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
H3F3AP84243 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3AP84243 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3AP84243 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
H3F3AP84243 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H3F3AP84243 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3AP84243 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
H3F3AP84243 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
H3F3AP84243 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3AP84243 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.57■□□□□ 0.24
H3F3AP84243 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
H3F3AP84243 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3AP84243 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.57■□□□□ 0.24
H3F3AP84243 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.57■□□□□ 0.24
H3F3AP84243 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3AP84243 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3AP84243 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3AP84243 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3AP84243 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3AP84243 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.57■□□□□ 0.24
H3F3AP84243 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3AP84243 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.57■□□□□ 0.24
H3F3AP84243 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3AP84243 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.57■□□□□ 0.24
H3F3AP84243 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.57■□□□□ 0.24
H3F3AP84243 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.57■□□□□ 0.24
H3F3AP84243 SEC1P-202ENST00000473944 940 ntBASIC16.57■□□□□ 0.24
H3F3AP84243 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.57■□□□□ 0.24
H3F3AP84243 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.57■□□□□ 0.24
H3F3AP84243 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.57■□□□□ 0.24
H3F3AP84243 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.57■□□□□ 0.24
H3F3AP84243 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3AP84243 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
H3F3AP84243 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3AP84243 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.57■□□□□ 0.24
H3F3AP84243 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H3F3AP84243 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
H3F3AP84243 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
H3F3AP84243 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
H3F3AP84243 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.56■□□□□ 0.24
H3F3AP84243 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
H3F3AP84243 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
H3F3AP84243 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 COX11P1-201ENST00000489116 835 ntBASIC16.56■□□□□ 0.24
H3F3AP84243 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.56■□□□□ 0.24
H3F3AP84243 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H3F3AP84243 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.55■□□□□ 0.24
H3F3AP84243 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
H3F3AP84243 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
H3F3AP84243 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.55■□□□□ 0.24
H3F3AP84243 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.55■□□□□ 0.24
H3F3AP84243 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.55■□□□□ 0.24
H3F3AP84243 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.55■□□□□ 0.24
H3F3AP84243 AC126763.1-201ENST00000552015 2118 ntBASIC16.55■□□□□ 0.24
H3F3AP84243 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.55■□□□□ 0.24
H3F3AP84243 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.55■□□□□ 0.24
H3F3AP84243 AL163051.1-201ENST00000569214 1512 ntBASIC16.55■□□□□ 0.24
H3F3AP84243 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H3F3AP84243 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.55■□□□□ 0.24
H3F3AP84243 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
H3F3AP84243 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.54■□□□□ 0.24
H3F3AP84243 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.54■□□□□ 0.24
H3F3AP84243 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H3F3AP84243 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms