Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IRX3P78415 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.54■■□□□ 1.04
IRX3P78415 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.54■■□□□ 1.04
IRX3P78415 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.54■■□□□ 1.04
IRX3P78415 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IRX3P78415 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IRX3P78415 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
IRX3P78415 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IRX3P78415 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IRX3P78415 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
IRX3P78415 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.54■■□□□ 1.04
IRX3P78415 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
IRX3P78415 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
IRX3P78415 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.53■■□□□ 1.04
IRX3P78415 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
IRX3P78415 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.53■■□□□ 1.04
IRX3P78415 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
IRX3P78415 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.53■■□□□ 1.04
IRX3P78415 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
IRX3P78415 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IRX3P78415 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
IRX3P78415 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
IRX3P78415 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
IRX3P78415 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
IRX3P78415 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
IRX3P78415 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
IRX3P78415 AP000347.1-202ENST00000435868 847 ntBASIC21.53■■□□□ 1.04
IRX3P78415 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.53■■□□□ 1.04
IRX3P78415 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.53■■□□□ 1.04
IRX3P78415 AC074051.2-201ENST00000565115 352 ntBASIC21.53■■□□□ 1.04
IRX3P78415 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
IRX3P78415 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.53■■□□□ 1.04
IRX3P78415 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.53■■□□□ 1.04
IRX3P78415 AC138894.3-201ENST00000603787 634 ntBASIC21.53■■□□□ 1.04
IRX3P78415 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
IRX3P78415 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.53■■□□□ 1.04
IRX3P78415 AC034236.2-201ENST00000606662 1610 ntBASIC21.53■■□□□ 1.04
IRX3P78415 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IRX3P78415 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IRX3P78415 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
IRX3P78415 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
IRX3P78415 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
IRX3P78415 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
IRX3P78415 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
IRX3P78415 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.53■■□□□ 1.04
IRX3P78415 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
IRX3P78415 KRT8P32-201ENST00000512863 1461 ntBASIC21.52■■□□□ 1.04
IRX3P78415 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX3P78415 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.52■■□□□ 1.04
IRX3P78415 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX3P78415 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.52■■□□□ 1.04
IRX3P78415 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX3P78415 TREX1-205ENST00000625293 1783 ntBASIC21.52■■□□□ 1.04
IRX3P78415 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
IRX3P78415 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX3P78415 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.52■■□□□ 1.04
IRX3P78415 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
IRX3P78415 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX3P78415 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX3P78415 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX3P78415 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
IRX3P78415 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
IRX3P78415 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.52■■□□□ 1.04
IRX3P78415 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX3P78415 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX3P78415 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.51■■□□□ 1.03
IRX3P78415 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IRX3P78415 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX3P78415 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX3P78415 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX3P78415 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX3P78415 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.51■■□□□ 1.03
IRX3P78415 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.51■■□□□ 1.03
IRX3P78415 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.51■■□□□ 1.03
IRX3P78415 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IRX3P78415 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX3P78415 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
IRX3P78415 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.51■■□□□ 1.03
IRX3P78415 AC079781.3-201ENST00000449110 356 ntBASIC21.51■■□□□ 1.03
IRX3P78415 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.51■■□□□ 1.03
IRX3P78415 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.51■■□□□ 1.03
IRX3P78415 AL160237.2-201ENST00000556165 472 ntBASIC21.51■■□□□ 1.03
IRX3P78415 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.51■■□□□ 1.03
IRX3P78415 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.51■■□□□ 1.03
IRX3P78415 FEM1AP3-201ENST00000403722 1741 ntBASIC21.51■■□□□ 1.03
IRX3P78415 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
IRX3P78415 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IRX3P78415 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
IRX3P78415 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IRX3P78415 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IRX3P78415 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IRX3P78415 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IRX3P78415 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
IRX3P78415 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.5■■□□□ 1.03
IRX3P78415 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
IRX3P78415 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.5■■□□□ 1.03
IRX3P78415 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
IRX3P78415 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IRX3P78415 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.5■■□□□ 1.03
IRX3P78415 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms