Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNRPFP62306 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.15■□□□□ 0.82
SNRPFP62306 AC034232.1-201ENST00000506026 1064 ntBASIC20.15■□□□□ 0.82
SNRPFP62306 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.15■□□□□ 0.82
SNRPFP62306 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
SNRPFP62306 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.15■□□□□ 0.82
SNRPFP62306 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.15■□□□□ 0.82
SNRPFP62306 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.15■□□□□ 0.82
SNRPFP62306 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.15■□□□□ 0.82
SNRPFP62306 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.15■□□□□ 0.82
SNRPFP62306 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SNRPFP62306 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNRPFP62306 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNRPFP62306 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SNRPFP62306 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.15■□□□□ 0.82
SNRPFP62306 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNRPFP62306 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNRPFP62306 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.15■□□□□ 0.82
SNRPFP62306 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNRPFP62306 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SNRPFP62306 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.15■□□□□ 0.82
SNRPFP62306 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNRPFP62306 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SNRPFP62306 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
SNRPFP62306 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SNRPFP62306 AC009113.1-201ENST00000570267 2443 ntBASIC20.14■□□□□ 0.82
SNRPFP62306 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
SNRPFP62306 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.14■□□□□ 0.82
SNRPFP62306 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNRPFP62306 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNRPFP62306 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.14■□□□□ 0.81
SNRPFP62306 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SNRPFP62306 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNRPFP62306 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNRPFP62306 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNRPFP62306 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNRPFP62306 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.14■□□□□ 0.81
SNRPFP62306 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.14■□□□□ 0.81
SNRPFP62306 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNRPFP62306 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.14■□□□□ 0.81
SNRPFP62306 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.14■□□□□ 0.81
SNRPFP62306 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SNRPFP62306 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNRPFP62306 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
SNRPFP62306 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.13■□□□□ 0.81
SNRPFP62306 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SNRPFP62306 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
SNRPFP62306 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SNRPFP62306 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SNRPFP62306 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SNRPFP62306 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
SNRPFP62306 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
SNRPFP62306 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.13■□□□□ 0.81
SNRPFP62306 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.13■□□□□ 0.81
SNRPFP62306 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 GCSHP2-201ENST00000560971 527 ntBASIC20.13■□□□□ 0.81
SNRPFP62306 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
SNRPFP62306 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.13■□□□□ 0.81
SNRPFP62306 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.13■□□□□ 0.81
SNRPFP62306 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNRPFP62306 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.12■□□□□ 0.81
SNRPFP62306 GMCL1P1-201ENST00000463439 1581 ntBASIC20.12■□□□□ 0.81
SNRPFP62306 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.12■□□□□ 0.81
SNRPFP62306 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.12■□□□□ 0.81
SNRPFP62306 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRPFP62306 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SNRPFP62306 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SNRPFP62306 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SNRPFP62306 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRPFP62306 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.12■□□□□ 0.81
SNRPFP62306 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRPFP62306 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRPFP62306 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRPFP62306 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.12■□□□□ 0.81
SNRPFP62306 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
SNRPFP62306 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.12■□□□□ 0.81
SNRPFP62306 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.12■□□□□ 0.81
SNRPFP62306 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.12■□□□□ 0.81
SNRPFP62306 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRPFP62306 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNRPFP62306 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRPFP62306 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNRPFP62306 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRPFP62306 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNRPFP62306 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms