Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NR1H2P55055 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NR1H2P55055 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
NR1H2P55055 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.58■□□□□ 0.41
NR1H2P55055 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.58■□□□□ 0.41
NR1H2P55055 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NR1H2P55055 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NR1H2P55055 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.58■□□□□ 0.4
NR1H2P55055 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
NR1H2P55055 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NR1H2P55055 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.58■□□□□ 0.4
NR1H2P55055 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.58■□□□□ 0.4
NR1H2P55055 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.58■□□□□ 0.4
NR1H2P55055 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 AL645608.8-201ENST00000606034 2086 ntBASIC17.58■□□□□ 0.4
NR1H2P55055 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.58■□□□□ 0.4
NR1H2P55055 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.58■□□□□ 0.4
NR1H2P55055 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.58■□□□□ 0.4
NR1H2P55055 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NR1H2P55055 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.58■□□□□ 0.4
NR1H2P55055 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.58■□□□□ 0.4
NR1H2P55055 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.58■□□□□ 0.4
NR1H2P55055 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.58■□□□□ 0.4
NR1H2P55055 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NR1H2P55055 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.57■□□□□ 0.4
NR1H2P55055 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NR1H2P55055 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.57■□□□□ 0.4
NR1H2P55055 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NR1H2P55055 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NR1H2P55055 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NR1H2P55055 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NR1H2P55055 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NR1H2P55055 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NR1H2P55055 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NR1H2P55055 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NR1H2P55055 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.57■□□□□ 0.4
NR1H2P55055 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.57■□□□□ 0.4
NR1H2P55055 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.57■□□□□ 0.4
NR1H2P55055 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NR1H2P55055 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NR1H2P55055 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NR1H2P55055 PTBP1P-201ENST00000554374 1601 ntBASIC17.57■□□□□ 0.4
NR1H2P55055 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NR1H2P55055 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NR1H2P55055 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.57■□□□□ 0.4
NR1H2P55055 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NR1H2P55055 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NR1H2P55055 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
NR1H2P55055 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
NR1H2P55055 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.56■□□□□ 0.4
NR1H2P55055 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NR1H2P55055 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.56■□□□□ 0.4
NR1H2P55055 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.56■□□□□ 0.4
NR1H2P55055 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.56■□□□□ 0.4
NR1H2P55055 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.56■□□□□ 0.4
NR1H2P55055 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.56■□□□□ 0.4
NR1H2P55055 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.56■□□□□ 0.4
NR1H2P55055 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.56■□□□□ 0.4
NR1H2P55055 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.56■□□□□ 0.4
NR1H2P55055 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NR1H2P55055 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NR1H2P55055 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NR1H2P55055 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms