Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AC112907.3-201ENST00000577781 2400 ntBASIC20.4■□□□□ 0.86
ATN1P54259 AC007375.3-201ENST00000600936 2314 ntBASIC20.4■□□□□ 0.86
ATN1P54259 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATN1P54259 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATN1P54259 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATN1P54259 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.39■□□□□ 0.86
ATN1P54259 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.39■□□□□ 0.86
ATN1P54259 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATN1P54259 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATN1P54259 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
ATN1P54259 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATN1P54259 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATN1P54259 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATN1P54259 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ATN1P54259 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATN1P54259 KRT89P-201ENST00000620027 1478 ntBASIC20.39■□□□□ 0.85
ATN1P54259 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATN1P54259 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATN1P54259 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATN1P54259 UPF3AP3-201ENST00000420996 769 ntBASIC20.39■□□□□ 0.85
ATN1P54259 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.39■□□□□ 0.85
ATN1P54259 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.39■□□□□ 0.85
ATN1P54259 AC140113.2-201ENST00000604370 208 ntBASIC20.39■□□□□ 0.85
ATN1P54259 AC027601.4-201ENST00000611259 610 ntBASIC20.39■□□□□ 0.85
ATN1P54259 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATN1P54259 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATN1P54259 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.39■□□□□ 0.85
ATN1P54259 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.39■□□□□ 0.85
ATN1P54259 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATN1P54259 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.39■□□□□ 0.85
ATN1P54259 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
ATN1P54259 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.38■□□□□ 0.85
ATN1P54259 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.38■□□□□ 0.85
ATN1P54259 RPS2P28-201ENST00000314255 741 ntBASIC20.38■□□□□ 0.85
ATN1P54259 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
ATN1P54259 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.38■□□□□ 0.85
ATN1P54259 MED15P5-201ENST00000423150 992 ntBASIC20.38■□□□□ 0.85
ATN1P54259 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATN1P54259 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.38■□□□□ 0.85
ATN1P54259 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.38■□□□□ 0.85
ATN1P54259 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATN1P54259 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.37■□□□□ 0.85
ATN1P54259 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ATN1P54259 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.37■□□□□ 0.85
ATN1P54259 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.37■□□□□ 0.85
ATN1P54259 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.37■□□□□ 0.85
ATN1P54259 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 AC022898.2-201ENST00000616822 1312 ntBASIC20.37■□□□□ 0.85
ATN1P54259 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.37■□□□□ 0.85
ATN1P54259 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
ATN1P54259 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.37■□□□□ 0.85
ATN1P54259 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.37■□□□□ 0.85
ATN1P54259 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.37■□□□□ 0.85
ATN1P54259 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATN1P54259 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATN1P54259 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.36■□□□□ 0.85
ATN1P54259 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATN1P54259 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATN1P54259 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATN1P54259 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATN1P54259 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.36■□□□□ 0.85
ATN1P54259 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.36■□□□□ 0.85
ATN1P54259 AP001160.2-201ENST00000596071 487 ntBASIC20.36■□□□□ 0.85
ATN1P54259 AP001269.4-201ENST00000609611 512 ntBASIC20.36■□□□□ 0.85
ATN1P54259 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATN1P54259 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.36■□□□□ 0.85
ATN1P54259 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATN1P54259 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATN1P54259 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATN1P54259 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.36■□□□□ 0.85
ATN1P54259 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATN1P54259 TP73-AS1-210ENST00000637775 1455 ntBASIC20.36■□□□□ 0.85
ATN1P54259 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATN1P54259 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms