Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUBP1P53384 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUBP1P53384 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUBP1P53384 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUBP1P53384 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.44■□□□□ 0.54
NUBP1P53384 AC007041.1-201ENST00000438989 1155 ntBASIC18.44■□□□□ 0.54
NUBP1P53384 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.44■□□□□ 0.54
NUBP1P53384 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC18.44■□□□□ 0.54
NUBP1P53384 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC18.44■□□□□ 0.54
NUBP1P53384 AC012640.2-201ENST00000561606 901 ntBASIC18.44■□□□□ 0.54
NUBP1P53384 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.44■□□□□ 0.54
NUBP1P53384 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC18.44■□□□□ 0.54
NUBP1P53384 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.44■□□□□ 0.54
NUBP1P53384 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUBP1P53384 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
NUBP1P53384 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.44■□□□□ 0.54
NUBP1P53384 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUBP1P53384 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
NUBP1P53384 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NUBP1P53384 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.43■□□□□ 0.54
NUBP1P53384 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NUBP1P53384 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.43■□□□□ 0.54
NUBP1P53384 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.43■□□□□ 0.54
NUBP1P53384 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.43■□□□□ 0.54
NUBP1P53384 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.43■□□□□ 0.54
NUBP1P53384 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.43■□□□□ 0.54
NUBP1P53384 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 PGM5P2-202ENST00000637225 1043 ntBASIC18.43■□□□□ 0.54
NUBP1P53384 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 AC008556.1-201ENST00000610908 2040 ntBASIC18.43■□□□□ 0.54
NUBP1P53384 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.43■□□□□ 0.54
NUBP1P53384 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NUBP1P53384 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.43■□□□□ 0.54
NUBP1P53384 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NUBP1P53384 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NUBP1P53384 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUBP1P53384 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NUBP1P53384 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC18.42■□□□□ 0.54
NUBP1P53384 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NUBP1P53384 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NUBP1P53384 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUBP1P53384 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUBP1P53384 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUBP1P53384 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUBP1P53384 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUBP1P53384 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NUBP1P53384 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUBP1P53384 AC023274.1-201ENST00000418278 595 ntBASIC18.42■□□□□ 0.54
NUBP1P53384 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC18.42■□□□□ 0.54
NUBP1P53384 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC18.42■□□□□ 0.54
NUBP1P53384 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.42■□□□□ 0.54
NUBP1P53384 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC18.42■□□□□ 0.54
NUBP1P53384 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.42■□□□□ 0.54
NUBP1P53384 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.42■□□□□ 0.54
NUBP1P53384 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.42■□□□□ 0.54
NUBP1P53384 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NUBP1P53384 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NUBP1P53384 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.42■□□□□ 0.54
NUBP1P53384 AC025062.2-201ENST00000605477 670 ntBASIC18.42■□□□□ 0.54
NUBP1P53384 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC18.42■□□□□ 0.54
NUBP1P53384 AC107918.4-202ENST00000641623 219 ntBASIC18.42■□□□□ 0.54
NUBP1P53384 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NUBP1P53384 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NUBP1P53384 AL512353.2-201ENST00000448759 1962 ntBASIC18.42■□□□□ 0.54
NUBP1P53384 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.42■□□□□ 0.54
NUBP1P53384 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.42■□□□□ 0.54
NUBP1P53384 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.42■□□□□ 0.54
NUBP1P53384 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.41■□□□□ 0.54
NUBP1P53384 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.41■□□□□ 0.54
NUBP1P53384 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.41■□□□□ 0.54
NUBP1P53384 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NUBP1P53384 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.41■□□□□ 0.54
NUBP1P53384 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
NUBP1P53384 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.41■□□□□ 0.54
NUBP1P53384 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
NUBP1P53384 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms