Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK7P50613 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDK7P50613 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.47■□□□□ 0.87
CDK7P50613 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK7P50613 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.47■□□□□ 0.87
CDK7P50613 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.47■□□□□ 0.87
CDK7P50613 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.47■□□□□ 0.87
CDK7P50613 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.47■□□□□ 0.87
CDK7P50613 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.47■□□□□ 0.87
CDK7P50613 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.47■□□□□ 0.87
CDK7P50613 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.47■□□□□ 0.87
CDK7P50613 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDK7P50613 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.47■□□□□ 0.87
CDK7P50613 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK7P50613 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDK7P50613 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDK7P50613 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.46■□□□□ 0.87
CDK7P50613 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDK7P50613 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.46■□□□□ 0.87
CDK7P50613 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CDK7P50613 KRT18P13-201ENST00000400056 1290 ntBASIC20.46■□□□□ 0.87
CDK7P50613 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDK7P50613 AL031284.1-201ENST00000419297 478 ntBASIC20.46■□□□□ 0.87
CDK7P50613 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.46■□□□□ 0.87
CDK7P50613 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.46■□□□□ 0.87
CDK7P50613 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.46■□□□□ 0.87
CDK7P50613 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.46■□□□□ 0.87
CDK7P50613 FEM1AP3-201ENST00000403722 1741 ntBASIC20.46■□□□□ 0.87
CDK7P50613 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDK7P50613 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDK7P50613 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDK7P50613 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.46■□□□□ 0.87
CDK7P50613 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK7P50613 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.45■□□□□ 0.86
CDK7P50613 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK7P50613 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK7P50613 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.45■□□□□ 0.86
CDK7P50613 MINOS1P3-201ENST00000457048 203 ntBASIC20.45■□□□□ 0.86
CDK7P50613 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.45■□□□□ 0.86
CDK7P50613 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.45■□□□□ 0.86
CDK7P50613 AC011840.4-201ENST00000578471 627 ntBASIC20.45■□□□□ 0.86
CDK7P50613 MIR5100-201ENST00000579544 119 ntBASIC20.45■□□□□ 0.86
CDK7P50613 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CDK7P50613 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CDK7P50613 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDK7P50613 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CDK7P50613 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CDK7P50613 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
CDK7P50613 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.45■□□□□ 0.86
CDK7P50613 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDK7P50613 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDK7P50613 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CDK7P50613 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK7P50613 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK7P50613 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.44■□□□□ 0.86
CDK7P50613 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.44■□□□□ 0.86
CDK7P50613 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDK7P50613 KRT18P67-201ENST00000432816 1264 ntBASIC20.44■□□□□ 0.86
CDK7P50613 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.44■□□□□ 0.86
CDK7P50613 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.44■□□□□ 0.86
CDK7P50613 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.44■□□□□ 0.86
CDK7P50613 BNIP3P18-201ENST00000593976 575 ntBASIC20.44■□□□□ 0.86
CDK7P50613 AC148477.8-201ENST00000624298 468 ntBASIC20.44■□□□□ 0.86
CDK7P50613 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.44■□□□□ 0.86
CDK7P50613 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK7P50613 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK7P50613 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDK7P50613 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDK7P50613 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK7P50613 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK7P50613 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK7P50613 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDK7P50613 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.44■□□□□ 0.86
CDK7P50613 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CDK7P50613 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CDK7P50613 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDK7P50613 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDK7P50613 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDK7P50613 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CDK7P50613 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDK7P50613 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDK7P50613 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CDK7P50613 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDK7P50613 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDK7P50613 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.43■□□□□ 0.86
CDK7P50613 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDK7P50613 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.43■□□□□ 0.86
CDK7P50613 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.43■□□□□ 0.86
CDK7P50613 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDK7P50613 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDK7P50613 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.43■□□□□ 0.86
CDK7P50613 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.43■□□□□ 0.86
CDK7P50613 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.43■□□□□ 0.86
CDK7P50613 AC009065.1-201ENST00000564055 1225 ntBASIC20.43■□□□□ 0.86
CDK7P50613 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.43■□□□□ 0.86
CDK7P50613 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.43■□□□□ 0.86
CDK7P50613 AL591684.3-201ENST00000605187 298 ntBASIC20.43■□□□□ 0.86
CDK7P50613 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDK7P50613 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDK7P50613 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms