Protein–RNA interactions for Protein: P48681

NES, Nestin, humanhuman

Predictions only

Length 1,621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NESP48681 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC31.88■■■□□ 2.69
NESP48681 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NESP48681 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC31.88■■■□□ 2.69
NESP48681 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
NESP48681 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC31.88■■■□□ 2.69
NESP48681 AL096865.1-201ENST00000606796 927 ntBASIC31.88■■■□□ 2.69
NESP48681 AC093028.1-201ENST00000622998 982 ntBASIC31.88■■■□□ 2.69
NESP48681 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC31.88■■■□□ 2.69
NESP48681 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NESP48681 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
NESP48681 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
NESP48681 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC31.87■■■□□ 2.69
NESP48681 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
NESP48681 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC31.87■■■□□ 2.69
NESP48681 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
NESP48681 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC31.87■■■□□ 2.69
NESP48681 LAGE3P1-201ENST00000425356 484 ntBASIC31.87■■■□□ 2.69
NESP48681 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC31.87■■■□□ 2.69
NESP48681 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC31.87■■■□□ 2.69
NESP48681 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC31.87■■■□□ 2.69
NESP48681 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC31.87■■■□□ 2.69
NESP48681 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
NESP48681 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
NESP48681 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
NESP48681 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC31.87■■■□□ 2.69
NESP48681 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC31.86■■■□□ 2.69
NESP48681 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NESP48681 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
NESP48681 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
NESP48681 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC31.86■■■□□ 2.69
NESP48681 DANCR-204ENST00000444958 709 ntTSL 3 BASIC31.86■■■□□ 2.69
NESP48681 AC068472.1-201ENST00000474589 881 ntBASIC31.86■■■□□ 2.69
NESP48681 AC113404.2-201ENST00000507884 177 ntBASIC31.86■■■□□ 2.69
NESP48681 RPL28-205ENST00000558131 444 ntTSL 5 BASIC31.86■■■□□ 2.69
NESP48681 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
NESP48681 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC31.86■■■□□ 2.69
NESP48681 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC31.86■■■□□ 2.69
NESP48681 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC31.86■■■□□ 2.69
NESP48681 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
NESP48681 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC31.86■■■□□ 2.69
NESP48681 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
NESP48681 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
NESP48681 AC002310.6-201ENST00000624451 1377 ntBASIC31.86■■■□□ 2.69
NESP48681 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NESP48681 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NESP48681 KLK8-202ENST00000320838 456 ntTSL 5 BASIC31.86■■■□□ 2.69
NESP48681 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
NESP48681 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC31.86■■■□□ 2.69
NESP48681 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NESP48681 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC31.86■■■□□ 2.69
NESP48681 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC31.86■■■□□ 2.69
NESP48681 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
NESP48681 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NESP48681 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
NESP48681 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
NESP48681 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
NESP48681 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC31.85■■■□□ 2.69
NESP48681 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
NESP48681 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC31.85■■■□□ 2.69
NESP48681 AC125634.1-201ENST00000438758 1403 ntBASIC31.85■■■□□ 2.69
NESP48681 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NESP48681 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NESP48681 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC31.85■■■□□ 2.69
NESP48681 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
NESP48681 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC31.85■■■□□ 2.69
NESP48681 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC31.85■■■□□ 2.69
NESP48681 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC31.85■■■□□ 2.69
NESP48681 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NESP48681 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC31.84■■■□□ 2.69
NESP48681 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NESP48681 NARF-204ENST00000390006 1766 ntTSL 2 BASIC31.84■■■□□ 2.69
NESP48681 TP73-202ENST00000354437 2140 ntTSL 5 BASIC31.84■■■□□ 2.69
NESP48681 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NESP48681 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NESP48681 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC31.84■■■□□ 2.69
NESP48681 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC31.84■■■□□ 2.69
NESP48681 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC31.84■■■□□ 2.69
NESP48681 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
NESP48681 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
NESP48681 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
NESP48681 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
NESP48681 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NESP48681 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NESP48681 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NESP48681 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NESP48681 PTMS-202ENST00000389462 773 ntTSL 2 BASIC31.83■■■□□ 2.69
NESP48681 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC31.83■■■□□ 2.69
NESP48681 AC108751.1-201ENST00000490852 363 ntBASIC31.83■■■□□ 2.69
NESP48681 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC31.83■■■□□ 2.69
NESP48681 AL078644.1-201ENST00000609881 752 ntBASIC31.83■■■□□ 2.69
NESP48681 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NESP48681 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC31.83■■■□□ 2.69
NESP48681 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NESP48681 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC31.83■■■□□ 2.69
NESP48681 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NESP48681 AC073621.1-201ENST00000392730 636 ntBASIC31.82■■■□□ 2.69
NESP48681 PUDP-206ENST00000540122 825 ntTSL 2 BASIC31.82■■■□□ 2.69
NESP48681 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC31.82■■■□□ 2.69
NESP48681 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC31.82■■■□□ 2.68
NESP48681 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms