Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SLC6A12P48065 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.89■□□□□ 0.46
SLC6A12P48065 ESPNP-201ENST00000270691 2015 ntBASIC17.89■□□□□ 0.46
SLC6A12P48065 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A12P48065 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A12P48065 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A12P48065 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A12P48065 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SLC6A12P48065 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SLC6A12P48065 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A12P48065 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A12P48065 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A12P48065 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A12P48065 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SLC6A12P48065 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A12P48065 HMGA1P5-201ENST00000412453 271 ntBASIC17.89■□□□□ 0.45
SLC6A12P48065 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A12P48065 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC6A12P48065 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC6A12P48065 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC6A12P48065 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.89■□□□□ 0.45
SLC6A12P48065 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.89■□□□□ 0.45
SLC6A12P48065 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A12P48065 AC112497.1-201ENST00000624824 639 ntBASIC17.89■□□□□ 0.45
SLC6A12P48065 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SLC6A12P48065 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A12P48065 SDHAP2-201ENST00000455183 2001 ntBASIC17.89■□□□□ 0.45
SLC6A12P48065 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A12P48065 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC6A12P48065 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SLC6A12P48065 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.89■□□□□ 0.45
SLC6A12P48065 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC6A12P48065 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SLC6A12P48065 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC6A12P48065 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC6A12P48065 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SLC6A12P48065 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SLC6A12P48065 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC6A12P48065 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
SLC6A12P48065 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 MIR149-201ENST00000384879 89 ntBASIC17.88■□□□□ 0.45
SLC6A12P48065 AC087499.1-201ENST00000418141 1075 ntBASIC17.88■□□□□ 0.45
SLC6A12P48065 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC6A12P48065 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.88■□□□□ 0.45
SLC6A12P48065 AC104390.1-201ENST00000555663 520 ntBASIC17.88■□□□□ 0.45
SLC6A12P48065 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.88■□□□□ 0.45
SLC6A12P48065 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC6A12P48065 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.88■□□□□ 0.45
SLC6A12P48065 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 LINC01568-207ENST00000641790 1380 ntBASIC17.88■□□□□ 0.45
SLC6A12P48065 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 AC009102.3-201ENST00000623118 1491 ntBASIC17.88■□□□□ 0.45
SLC6A12P48065 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SLC6A12P48065 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC6A12P48065 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC6A12P48065 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC6A12P48065 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A12P48065 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A12P48065 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A12P48065 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.87■□□□□ 0.45
SLC6A12P48065 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC6A12P48065 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC6A12P48065 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.87■□□□□ 0.45
SLC6A12P48065 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC6A12P48065 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC6A12P48065 MIR3180-4-201ENST00000582223 153 ntBASIC17.87■□□□□ 0.45
SLC6A12P48065 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC6A12P48065 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.87■□□□□ 0.45
SLC6A12P48065 AC145285.6-201ENST00000604632 637 ntBASIC17.87■□□□□ 0.45
SLC6A12P48065 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A12P48065 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.87■□□□□ 0.45
SLC6A12P48065 AC007613.1-201ENST00000572811 2597 ntBASIC17.87■□□□□ 0.45
SLC6A12P48065 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SLC6A12P48065 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A12P48065 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SLC6A12P48065 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC6A12P48065 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A12P48065 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A12P48065 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.87■□□□□ 0.45
SLC6A12P48065 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A12P48065 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A12P48065 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A12P48065 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A12P48065 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SLC6A12P48065 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC6A12P48065 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SLC6A12P48065 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SLC6A12P48065 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.86■□□□□ 0.45
SLC6A12P48065 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms