Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
BRCC3P46736 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRCC3P46736 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRCC3P46736 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
BRCC3P46736 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRCC3P46736 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRCC3P46736 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
BRCC3P46736 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
BRCC3P46736 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.72■□□□□ 0.75
BRCC3P46736 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 AL163051.1-201ENST00000569214 1512 ntBASIC19.71■□□□□ 0.75
BRCC3P46736 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
BRCC3P46736 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.71■□□□□ 0.75
BRCC3P46736 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 AL450487.1-201ENST00000426799 995 ntBASIC19.71■□□□□ 0.75
BRCC3P46736 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.71■□□□□ 0.75
BRCC3P46736 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.71■□□□□ 0.75
BRCC3P46736 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.71■□□□□ 0.75
BRCC3P46736 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.71■□□□□ 0.75
BRCC3P46736 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.71■□□□□ 0.75
BRCC3P46736 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
BRCC3P46736 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.71■□□□□ 0.75
BRCC3P46736 KRT18P1-202ENST00000452408 1331 ntBASIC19.71■□□□□ 0.75
BRCC3P46736 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.71■□□□□ 0.75
BRCC3P46736 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
BRCC3P46736 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.7■□□□□ 0.74
BRCC3P46736 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRCC3P46736 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
BRCC3P46736 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRCC3P46736 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.7■□□□□ 0.74
BRCC3P46736 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.7■□□□□ 0.74
BRCC3P46736 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.7■□□□□ 0.74
BRCC3P46736 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.7■□□□□ 0.74
BRCC3P46736 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.7■□□□□ 0.74
BRCC3P46736 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRCC3P46736 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.7■□□□□ 0.74
BRCC3P46736 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.7■□□□□ 0.74
BRCC3P46736 AC024563.2-201ENST00000603282 481 ntBASIC19.7■□□□□ 0.74
BRCC3P46736 AL390719.2-201ENST00000606993 987 ntBASIC19.7■□□□□ 0.74
BRCC3P46736 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.7■□□□□ 0.74
BRCC3P46736 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.7■□□□□ 0.74
BRCC3P46736 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
BRCC3P46736 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.7■□□□□ 0.74
BRCC3P46736 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRCC3P46736 AL499627.1-201ENST00000569373 2188 ntBASIC19.7■□□□□ 0.74
BRCC3P46736 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRCC3P46736 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRCC3P46736 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRCC3P46736 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRCC3P46736 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BRCC3P46736 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.69■□□□□ 0.74
BRCC3P46736 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRCC3P46736 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRCC3P46736 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRCC3P46736 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRCC3P46736 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
BRCC3P46736 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRCC3P46736 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRCC3P46736 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
BRCC3P46736 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.69■□□□□ 0.74
BRCC3P46736 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.69■□□□□ 0.74
BRCC3P46736 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.69■□□□□ 0.74
BRCC3P46736 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.69■□□□□ 0.74
BRCC3P46736 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
BRCC3P46736 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
BRCC3P46736 MIR3652-201ENST00000579335 131 ntBASIC19.69■□□□□ 0.74
BRCC3P46736 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.69■□□□□ 0.74
BRCC3P46736 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.69■□□□□ 0.74
BRCC3P46736 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRCC3P46736 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.69■□□□□ 0.74
BRCC3P46736 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.69■□□□□ 0.74
BRCC3P46736 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRCC3P46736 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRCC3P46736 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRCC3P46736 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
BRCC3P46736 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRCC3P46736 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.68■□□□□ 0.74
BRCC3P46736 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRCC3P46736 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRCC3P46736 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
BRCC3P46736 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.68■□□□□ 0.74
BRCC3P46736 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRCC3P46736 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.68■□□□□ 0.74
BRCC3P46736 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms