Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBX5P45973 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBX5P45973 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBX5P45973 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CBX5P45973 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.98■□□□□ 0.15
CBX5P45973 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.98■□□□□ 0.15
CBX5P45973 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CBX5P45973 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.98■□□□□ 0.15
CBX5P45973 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.98■□□□□ 0.15
CBX5P45973 AC006557.6-201ENST00000623071 864 ntBASIC15.98■□□□□ 0.15
CBX5P45973 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CBX5P45973 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBX5P45973 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBX5P45973 AC068418.2-201ENST00000577309 3703 ntBASIC15.98■□□□□ 0.15
CBX5P45973 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CBX5P45973 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBX5P45973 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.98■□□□□ 0.15
CBX5P45973 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.98■□□□□ 0.15
CBX5P45973 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
CBX5P45973 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBX5P45973 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
CBX5P45973 AL162727.3-201ENST00000635661 2787 ntBASIC15.98■□□□□ 0.15
CBX5P45973 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CBX5P45973 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CBX5P45973 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX5P45973 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CBX5P45973 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.97■□□□□ 0.15
CBX5P45973 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CBX5P45973 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX5P45973 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX5P45973 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX5P45973 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.97■□□□□ 0.15
CBX5P45973 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX5P45973 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX5P45973 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CBX5P45973 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CBX5P45973 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.97■□□□□ 0.15
CBX5P45973 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.97■□□□□ 0.15
CBX5P45973 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CBX5P45973 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CBX5P45973 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CBX5P45973 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.96■□□□□ 0.15
CBX5P45973 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CBX5P45973 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.96■□□□□ 0.15
CBX5P45973 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.96■□□□□ 0.15
CBX5P45973 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.96■□□□□ 0.15
CBX5P45973 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.96■□□□□ 0.15
CBX5P45973 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.96■□□□□ 0.15
CBX5P45973 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CBX5P45973 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.96■□□□□ 0.15
CBX5P45973 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 BX276092.2-201ENST00000417668 665 ntBASIC15.96■□□□□ 0.15
CBX5P45973 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.96■□□□□ 0.15
CBX5P45973 AC126763.1-201ENST00000552015 2118 ntBASIC15.96■□□□□ 0.15
CBX5P45973 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.96■□□□□ 0.15
CBX5P45973 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.96■□□□□ 0.15
CBX5P45973 MYC-208ENST00000641036 567 ntBASIC15.96■□□□□ 0.15
CBX5P45973 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CBX5P45973 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CBX5P45973 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
CBX5P45973 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
CBX5P45973 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CBX5P45973 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms