Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.81■□□□□ 0.92
HTTP42858 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HTTP42858 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 AC092910.1-201ENST00000482027 1129 ntBASIC20.8■□□□□ 0.92
HTTP42858 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.8■□□□□ 0.92
HTTP42858 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.8■□□□□ 0.92
HTTP42858 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HTTP42858 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.8■□□□□ 0.92
HTTP42858 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.8■□□□□ 0.92
HTTP42858 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.8■□□□□ 0.92
HTTP42858 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.8■□□□□ 0.92
HTTP42858 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.8■□□□□ 0.92
HTTP42858 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HTTP42858 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.8■□□□□ 0.92
HTTP42858 AC023274.1-201ENST00000418278 595 ntBASIC20.8■□□□□ 0.92
HTTP42858 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.8■□□□□ 0.92
HTTP42858 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.8■□□□□ 0.92
HTTP42858 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HTTP42858 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HTTP42858 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.79■□□□□ 0.92
HTTP42858 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HTTP42858 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.79■□□□□ 0.92
HTTP42858 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.79■□□□□ 0.92
HTTP42858 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.79■□□□□ 0.92
HTTP42858 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.79■□□□□ 0.92
HTTP42858 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HTTP42858 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.79■□□□□ 0.92
HTTP42858 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.79■□□□□ 0.92
HTTP42858 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
HTTP42858 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HTTP42858 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTTP42858 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTTP42858 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTTP42858 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.79■□□□□ 0.92
HTTP42858 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.79■□□□□ 0.92
HTTP42858 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.79■□□□□ 0.92
HTTP42858 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HTTP42858 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HTTP42858 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HTTP42858 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.78■□□□□ 0.92
HTTP42858 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.78■□□□□ 0.92
HTTP42858 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.78■□□□□ 0.92
HTTP42858 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
HTTP42858 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.78■□□□□ 0.92
HTTP42858 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTTP42858 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HTTP42858 MIR4469-201ENST00000583919 79 ntBASIC20.78■□□□□ 0.92
HTTP42858 MTDHP5-201ENST00000598980 586 ntBASIC20.78■□□□□ 0.92
HTTP42858 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTTP42858 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTTP42858 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.78■□□□□ 0.92
HTTP42858 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTTP42858 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTTP42858 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTTP42858 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HTTP42858 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.78■□□□□ 0.92
HTTP42858 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.78■□□□□ 0.92
HTTP42858 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.78■□□□□ 0.92
HTTP42858 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.78■□□□□ 0.92
HTTP42858 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.78■□□□□ 0.92
HTTP42858 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
HTTP42858 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.78■□□□□ 0.92
HTTP42858 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.78■□□□□ 0.92
HTTP42858 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTTP42858 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTTP42858 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTTP42858 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.77■□□□□ 0.92
HTTP42858 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.77■□□□□ 0.92
HTTP42858 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.77■□□□□ 0.92
HTTP42858 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HTTP42858 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.77■□□□□ 0.92
HTTP42858 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.77■□□□□ 0.92
HTTP42858 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HTTP42858 AC106028.4-201ENST00000614509 607 ntBASIC20.77■□□□□ 0.92
HTTP42858 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HTTP42858 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HTTP42858 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTTP42858 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTTP42858 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HTTP42858 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.77■□□□□ 0.92
HTTP42858 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HTTP42858 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HTTP42858 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HTTP42858 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.76■□□□□ 0.91
HTTP42858 MIR1199-201ENST00000621445 119 ntBASIC20.76■□□□□ 0.91
HTTP42858 AC008735.5-201ENST00000623544 497 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms