Protein–RNA interactions for Protein: P42263

GRIA3, Glutamate receptor 3, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3P42263 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA3P42263 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA3P42263 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA3P42263 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GRIA3P42263 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GRIA3P42263 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
GRIA3P42263 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.29■□□□□ 0.52
GRIA3P42263 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GRIA3P42263 AL354751.1-201ENST00000412768 1863 ntBASIC18.29■□□□□ 0.52
GRIA3P42263 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
GRIA3P42263 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.28■□□□□ 0.52
GRIA3P42263 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.28■□□□□ 0.52
GRIA3P42263 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.28■□□□□ 0.52
GRIA3P42263 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.28■□□□□ 0.52
GRIA3P42263 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.28■□□□□ 0.52
GRIA3P42263 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 TSPY14P-201ENST00000303979 915 ntBASIC18.28■□□□□ 0.52
GRIA3P42263 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 INGX-201ENST00000359239 846 ntBASIC18.28■□□□□ 0.52
GRIA3P42263 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.28■□□□□ 0.52
GRIA3P42263 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.28■□□□□ 0.52
GRIA3P42263 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
GRIA3P42263 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.28■□□□□ 0.52
GRIA3P42263 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.28■□□□□ 0.52
GRIA3P42263 AC097493.4-201ENST00000641197 219 ntBASIC18.28■□□□□ 0.52
GRIA3P42263 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GRIA3P42263 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.28■□□□□ 0.52
GRIA3P42263 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GRIA3P42263 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.28■□□□□ 0.52
GRIA3P42263 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.28■□□□□ 0.52
GRIA3P42263 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.28■□□□□ 0.52
GRIA3P42263 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.28■□□□□ 0.52
GRIA3P42263 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.28■□□□□ 0.52
GRIA3P42263 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GRIA3P42263 NOC2LP1-202ENST00000452600 2235 ntBASIC18.27■□□□□ 0.52
GRIA3P42263 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.27■□□□□ 0.52
GRIA3P42263 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GRIA3P42263 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
GRIA3P42263 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GRIA3P42263 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GRIA3P42263 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GRIA3P42263 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
GRIA3P42263 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
GRIA3P42263 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GRIA3P42263 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GRIA3P42263 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.27■□□□□ 0.52
GRIA3P42263 SLC25A1P2-201ENST00000430693 912 ntBASIC18.27■□□□□ 0.52
GRIA3P42263 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.27■□□□□ 0.52
GRIA3P42263 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GRIA3P42263 CA15P1-201ENST00000481698 905 ntBASIC18.27■□□□□ 0.52
GRIA3P42263 EGLN1P1-201ENST00000531623 762 ntBASIC18.27■□□□□ 0.52
GRIA3P42263 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.27■□□□□ 0.52
GRIA3P42263 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.27■□□□□ 0.52
GRIA3P42263 IRX1P1-201ENST00000438849 1838 ntBASIC18.27■□□□□ 0.52
GRIA3P42263 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.27■□□□□ 0.52
GRIA3P42263 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GRIA3P42263 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GRIA3P42263 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GRIA3P42263 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
GRIA3P42263 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
GRIA3P42263 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
GRIA3P42263 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GRIA3P42263 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
GRIA3P42263 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GRIA3P42263 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GRIA3P42263 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GRIA3P42263 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GRIA3P42263 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GRIA3P42263 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.27■□□□□ 0.51
GRIA3P42263 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
GRIA3P42263 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
GRIA3P42263 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.27■□□□□ 0.51
GRIA3P42263 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.27■□□□□ 0.51
GRIA3P42263 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.27■□□□□ 0.51
GRIA3P42263 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GRIA3P42263 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GRIA3P42263 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GRIA3P42263 FEM1AP3-201ENST00000403722 1741 ntBASIC18.26■□□□□ 0.51
GRIA3P42263 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GRIA3P42263 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.26■□□□□ 0.51
GRIA3P42263 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.26■□□□□ 0.51
GRIA3P42263 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GRIA3P42263 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GRIA3P42263 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.26■□□□□ 0.51
GRIA3P42263 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GRIA3P42263 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.26■□□□□ 0.51
GRIA3P42263 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GRIA3P42263 ECEL1P2-202ENST00000465689 757 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms