Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.07■□□□□ 0.48
EPHA3P29320 AC133041.1-202ENST00000642053 222 ntBASIC18.07■□□□□ 0.48
EPHA3P29320 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.07■□□□□ 0.48
EPHA3P29320 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.07■□□□□ 0.48
EPHA3P29320 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.07■□□□□ 0.48
EPHA3P29320 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.07■□□□□ 0.48
EPHA3P29320 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.07■□□□□ 0.48
EPHA3P29320 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
EPHA3P29320 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHA3P29320 AC008556.1-201ENST00000610908 2040 ntBASIC18.06■□□□□ 0.48
EPHA3P29320 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
EPHA3P29320 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHA3P29320 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.06■□□□□ 0.48
EPHA3P29320 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
EPHA3P29320 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHA3P29320 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
EPHA3P29320 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.06■□□□□ 0.48
EPHA3P29320 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHA3P29320 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
EPHA3P29320 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.06■□□□□ 0.48
EPHA3P29320 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.06■□□□□ 0.48
EPHA3P29320 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
EPHA3P29320 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
EPHA3P29320 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
EPHA3P29320 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.06■□□□□ 0.48
EPHA3P29320 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EPHA3P29320 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA3P29320 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA3P29320 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
EPHA3P29320 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA3P29320 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.05■□□□□ 0.48
EPHA3P29320 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA3P29320 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
EPHA3P29320 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.05■□□□□ 0.48
EPHA3P29320 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.05■□□□□ 0.48
EPHA3P29320 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA3P29320 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA3P29320 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA3P29320 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.05■□□□□ 0.48
EPHA3P29320 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.05■□□□□ 0.48
EPHA3P29320 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA3P29320 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.05■□□□□ 0.48
EPHA3P29320 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA3P29320 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
EPHA3P29320 UNC93B5-201ENST00000530315 699 ntBASIC18.05■□□□□ 0.48
EPHA3P29320 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.05■□□□□ 0.48
EPHA3P29320 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
EPHA3P29320 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.05■□□□□ 0.48
EPHA3P29320 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA3P29320 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA3P29320 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.05■□□□□ 0.48
EPHA3P29320 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EPHA3P29320 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHA3P29320 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHA3P29320 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
EPHA3P29320 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 AC106820.2-201ENST00000563775 3264 ntBASIC18.04■□□□□ 0.48
EPHA3P29320 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.04■□□□□ 0.48
EPHA3P29320 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EPHA3P29320 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.04■□□□□ 0.48
EPHA3P29320 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.04■□□□□ 0.48
EPHA3P29320 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHA3P29320 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.04■□□□□ 0.48
EPHA3P29320 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms