Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB3BP20337 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RAB3BP20337 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RAB3BP20337 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB3BP20337 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB3BP20337 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.26■□□□□ 0.19
RAB3BP20337 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB3BP20337 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB3BP20337 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB3BP20337 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB3BP20337 AL121829.2-201ENST00000620908 328 ntBASIC16.26■□□□□ 0.19
RAB3BP20337 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RAB3BP20337 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB3BP20337 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB3BP20337 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 KRT8P45-201ENST00000414328 1447 ntBASIC16.26■□□□□ 0.19
RAB3BP20337 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB3BP20337 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB3BP20337 AC099398.1-201ENST00000567919 2776 ntBASIC16.26■□□□□ 0.19
RAB3BP20337 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB3BP20337 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB3BP20337 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB3BP20337 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB3BP20337 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
RAB3BP20337 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.25■□□□□ 0.19
RAB3BP20337 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.25■□□□□ 0.19
RAB3BP20337 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.25■□□□□ 0.19
RAB3BP20337 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RAB3BP20337 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RAB3BP20337 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB3BP20337 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
RAB3BP20337 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RAB3BP20337 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RAB3BP20337 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RAB3BP20337 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RAB3BP20337 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB3BP20337 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB3BP20337 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB3BP20337 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3BP20337 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3BP20337 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3BP20337 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
RAB3BP20337 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3BP20337 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RAB3BP20337 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3BP20337 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3BP20337 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RAB3BP20337 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3BP20337 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RAB3BP20337 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3BP20337 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3BP20337 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3BP20337 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3BP20337 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
RAB3BP20337 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RAB3BP20337 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RAB3BP20337 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RAB3BP20337 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.24■□□□□ 0.19
RAB3BP20337 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.24■□□□□ 0.19
RAB3BP20337 AF201337.1-201ENST00000520239 748 ntBASIC16.24■□□□□ 0.19
RAB3BP20337 AC105036.2-201ENST00000569468 176 ntBASIC16.24■□□□□ 0.19
RAB3BP20337 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.24■□□□□ 0.19
RAB3BP20337 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.24■□□□□ 0.19
RAB3BP20337 AC087623.3-201ENST00000607047 1098 ntBASIC16.24■□□□□ 0.19
RAB3BP20337 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RAB3BP20337 MIR6821-201ENST00000617625 74 ntBASIC16.24■□□□□ 0.19
RAB3BP20337 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB3BP20337 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.24■□□□□ 0.19
RAB3BP20337 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.24■□□□□ 0.19
RAB3BP20337 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms