Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL11A2P13942 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COL11A2P13942 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL11A2P13942 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL11A2P13942 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
COL11A2P13942 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.64■■□□□ 1.21
COL11A2P13942 AC132008.2-207ENST00000454517 770 ntBASIC22.64■■□□□ 1.21
COL11A2P13942 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
COL11A2P13942 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC22.64■■□□□ 1.21
COL11A2P13942 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC22.64■■□□□ 1.21
COL11A2P13942 AL356488.2-201ENST00000602755 427 ntBASIC22.64■■□□□ 1.21
COL11A2P13942 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL11A2P13942 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL11A2P13942 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL11A2P13942 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL11A2P13942 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL11A2P13942 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL11A2P13942 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL11A2P13942 ZNF259P1-201ENST00000407656 1365 ntBASIC22.64■■□□□ 1.21
COL11A2P13942 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
COL11A2P13942 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL11A2P13942 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL11A2P13942 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL11A2P13942 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL11A2P13942 RPSAP43-201ENST00000402237 625 ntBASIC22.63■■□□□ 1.21
COL11A2P13942 GPX1P2-201ENST00000429271 606 ntBASIC22.63■■□□□ 1.21
COL11A2P13942 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC22.63■■□□□ 1.21
COL11A2P13942 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.63■■□□□ 1.21
COL11A2P13942 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.63■■□□□ 1.21
COL11A2P13942 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC22.63■■□□□ 1.21
COL11A2P13942 Z83851.2-201ENST00000609564 659 ntBASIC22.63■■□□□ 1.21
COL11A2P13942 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL11A2P13942 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC22.63■■□□□ 1.21
COL11A2P13942 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL11A2P13942 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL11A2P13942 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL11A2P13942 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL11A2P13942 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL11A2P13942 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC22.62■■□□□ 1.21
COL11A2P13942 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22.62■■□□□ 1.21
COL11A2P13942 MIR149-201ENST00000384879 89 ntBASIC22.62■■□□□ 1.21
COL11A2P13942 YBX2P1-201ENST00000394192 760 ntBASIC22.62■■□□□ 1.21
COL11A2P13942 UPF3AP3-201ENST00000420996 769 ntBASIC22.62■■□□□ 1.21
COL11A2P13942 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22.62■■□□□ 1.21
COL11A2P13942 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.62■■□□□ 1.21
COL11A2P13942 FAM197Y3-203ENST00000618346 717 ntBASIC22.62■■□□□ 1.21
COL11A2P13942 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
COL11A2P13942 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.62■■□□□ 1.21
COL11A2P13942 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
COL11A2P13942 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.62■■□□□ 1.21
COL11A2P13942 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC22.62■■□□□ 1.21
COL11A2P13942 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.62■■□□□ 1.21
COL11A2P13942 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 PNMT-203ENST00000581428 677 ntTSL 2 BASIC22.62■■□□□ 1.21
COL11A2P13942 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 AC025062.2-201ENST00000605477 670 ntBASIC22.62■■□□□ 1.21
COL11A2P13942 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC22.62■■□□□ 1.21
COL11A2P13942 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL11A2P13942 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL11A2P13942 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL11A2P13942 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
COL11A2P13942 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL11A2P13942 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.61■■□□□ 1.21
COL11A2P13942 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.61■■□□□ 1.21
COL11A2P13942 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL11A2P13942 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL11A2P13942 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL11A2P13942 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC22.61■■□□□ 1.21
COL11A2P13942 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
COL11A2P13942 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
COL11A2P13942 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL11A2P13942 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL11A2P13942 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
COL11A2P13942 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.61■■□□□ 1.21
COL11A2P13942 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
COL11A2P13942 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL11A2P13942 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.6■■□□□ 1.21
COL11A2P13942 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL11A2P13942 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL11A2P13942 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.6■■□□□ 1.21
COL11A2P13942 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC22.6■■□□□ 1.21
COL11A2P13942 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC22.6■■□□□ 1.21
COL11A2P13942 RBSN-204ENST00000449050 903 ntTSL 2 BASIC22.6■■□□□ 1.21
COL11A2P13942 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms