Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB40ALP0C0E4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 AL691432.3-201ENST00000621860 400 ntBASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAB40ALP0C0E4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
RAB40ALP0C0E4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.46■□□□□ 0.38
RAB40ALP0C0E4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.46■□□□□ 0.38
RAB40ALP0C0E4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 PVRIG2P-201ENST00000435460 978 ntBASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 MIR3652-201ENST00000579335 131 ntBASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
RAB40ALP0C0E4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAB40ALP0C0E4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms