Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AC104417.2-201ENST00000562989 1793 ntBASIC21.2■□□□□ 0.98
MYCNP04198 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MYCNP04198 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MYCNP04198 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MYCNP04198 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
MYCNP04198 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.19■□□□□ 0.98
MYCNP04198 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.19■□□□□ 0.98
MYCNP04198 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC21.19■□□□□ 0.98
MYCNP04198 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 AC079776.4-201ENST00000511039 504 ntBASIC21.19■□□□□ 0.98
MYCNP04198 KRT8P26-201ENST00000534154 1276 ntBASIC21.19■□□□□ 0.98
MYCNP04198 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.19■□□□□ 0.98
MYCNP04198 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.19■□□□□ 0.98
MYCNP04198 AC090506.2-201ENST00000624521 419 ntBASIC21.19■□□□□ 0.98
MYCNP04198 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.19■□□□□ 0.98
MYCNP04198 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
MYCNP04198 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MYCNP04198 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.19■□□□□ 0.98
MYCNP04198 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
MYCNP04198 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MYCNP04198 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.18■□□□□ 0.98
MYCNP04198 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
MYCNP04198 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
MYCNP04198 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.18■□□□□ 0.98
MYCNP04198 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 TSPY22P-201ENST00000427496 604 ntBASIC21.18■□□□□ 0.98
MYCNP04198 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.18■□□□□ 0.98
MYCNP04198 KRT17P6-201ENST00000453795 1220 ntBASIC21.18■□□□□ 0.98
MYCNP04198 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.18■□□□□ 0.98
MYCNP04198 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC21.18■□□□□ 0.98
MYCNP04198 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.18■□□□□ 0.98
MYCNP04198 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.18■□□□□ 0.98
MYCNP04198 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.18■□□□□ 0.98
MYCNP04198 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MYCNP04198 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.18■□□□□ 0.98
MYCNP04198 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MYCNP04198 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.18■□□□□ 0.98
MYCNP04198 AL157888.1-201ENST00000631930 593 ntBASIC21.18■□□□□ 0.98
MYCNP04198 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.18■□□□□ 0.98
MYCNP04198 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.18■□□□□ 0.98
MYCNP04198 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC21.18■□□□□ 0.98
MYCNP04198 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
MYCNP04198 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.18■□□□□ 0.98
MYCNP04198 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.18■□□□□ 0.98
MYCNP04198 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.18■□□□□ 0.98
MYCNP04198 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MYCNP04198 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYCNP04198 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
MYCNP04198 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
MYCNP04198 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYCNP04198 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYCNP04198 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYCNP04198 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYCNP04198 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYCNP04198 AL023284.2-201ENST00000405850 579 ntBASIC21.17■□□□□ 0.98
MYCNP04198 CHCHD2P8-201ENST00000429873 447 ntBASIC21.17■□□□□ 0.98
MYCNP04198 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.17■□□□□ 0.98
MYCNP04198 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
MYCNP04198 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.17■□□□□ 0.98
MYCNP04198 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.17■□□□□ 0.98
MYCNP04198 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYCNP04198 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
MYCNP04198 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC21.17■□□□□ 0.98
MYCNP04198 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.17■□□□□ 0.98
MYCNP04198 AC079602.3-201ENST00000623931 403 ntBASIC21.17■□□□□ 0.98
MYCNP04198 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.17■□□□□ 0.98
MYCNP04198 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.17■□□□□ 0.98
MYCNP04198 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYCNP04198 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYCNP04198 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
MYCNP04198 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYCNP04198 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYCNP04198 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
MYCNP04198 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MYCNP04198 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms