Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
MBD3O95983 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
MBD3O95983 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.28■■□□□ 1
MBD3O95983 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MBD3O95983 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MBD3O95983 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
MBD3O95983 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
MBD3O95983 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.27■■□□□ 1
MBD3O95983 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.27■■□□□ 1
MBD3O95983 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
MBD3O95983 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.27■■□□□ 1
MBD3O95983 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.27■■□□□ 1
MBD3O95983 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.27■■□□□ 1
MBD3O95983 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.27■■□□□ 1
MBD3O95983 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.27■■□□□ 1
MBD3O95983 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.27■■□□□ 1
MBD3O95983 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.27■■□□□ 1
MBD3O95983 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
MBD3O95983 AC060766.5-201ENST00000590539 871 ntBASIC21.27■■□□□ 1
MBD3O95983 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.27■■□□□ 1
MBD3O95983 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.27■■□□□ 1
MBD3O95983 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MBD3O95983 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
MBD3O95983 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MBD3O95983 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
MBD3O95983 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MBD3O95983 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.27■■□□□ 1
MBD3O95983 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MBD3O95983 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
MBD3O95983 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
MBD3O95983 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.27■■□□□ 1
MBD3O95983 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.27■□□□□ 0.99
MBD3O95983 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
MBD3O95983 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.27■□□□□ 0.99
MBD3O95983 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
MBD3O95983 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3O95983 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3O95983 PCDHA12-202ENST00000613593 2588 ntBASIC21.26■□□□□ 0.99
MBD3O95983 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.26■□□□□ 0.99
MBD3O95983 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
MBD3O95983 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3O95983 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3O95983 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.26■□□□□ 0.99
MBD3O95983 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.26■□□□□ 0.99
MBD3O95983 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3O95983 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3O95983 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.26■□□□□ 0.99
MBD3O95983 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.26■□□□□ 0.99
MBD3O95983 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
MBD3O95983 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3O95983 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3O95983 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3O95983 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MBD3O95983 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
MBD3O95983 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3O95983 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3O95983 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3O95983 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3O95983 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3O95983 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.25■□□□□ 0.99
MBD3O95983 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.25■□□□□ 0.99
MBD3O95983 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3O95983 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
MBD3O95983 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.25■□□□□ 0.99
MBD3O95983 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.25■□□□□ 0.99
MBD3O95983 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3O95983 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.25■□□□□ 0.99
MBD3O95983 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.25■□□□□ 0.99
MBD3O95983 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.25■□□□□ 0.99
MBD3O95983 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3O95983 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3O95983 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3O95983 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
MBD3O95983 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.24■□□□□ 0.99
MBD3O95983 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
MBD3O95983 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.24■□□□□ 0.99
MBD3O95983 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MBD3O95983 AC108860.2-201ENST00000562760 2183 ntBASIC21.24■□□□□ 0.99
MBD3O95983 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MBD3O95983 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.24■□□□□ 0.99
MBD3O95983 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
MBD3O95983 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.24■□□□□ 0.99
MBD3O95983 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MBD3O95983 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MBD3O95983 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MBD3O95983 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.24■□□□□ 0.99
MBD3O95983 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.24■□□□□ 0.99
MBD3O95983 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
MBD3O95983 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MBD3O95983 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.24■□□□□ 0.99
MBD3O95983 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.24■□□□□ 0.99
MBD3O95983 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MBD3O95983 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.24■□□□□ 0.99
MBD3O95983 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
MBD3O95983 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
MBD3O95983 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.24■□□□□ 0.99
MBD3O95983 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MBD3O95983 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MBD3O95983 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MBD3O95983 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms