Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.44■□□□□ 0.7
TRUB2O95900 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRUB2O95900 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRUB2O95900 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.44■□□□□ 0.7
TRUB2O95900 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.44■□□□□ 0.7
TRUB2O95900 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRUB2O95900 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRUB2O95900 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.44■□□□□ 0.7
TRUB2O95900 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.43■□□□□ 0.7
TRUB2O95900 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRUB2O95900 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.43■□□□□ 0.7
TRUB2O95900 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRUB2O95900 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.43■□□□□ 0.7
TRUB2O95900 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.43■□□□□ 0.7
TRUB2O95900 COX11P1-201ENST00000489116 835 ntBASIC19.43■□□□□ 0.7
TRUB2O95900 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.43■□□□□ 0.7
TRUB2O95900 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.43■□□□□ 0.7
TRUB2O95900 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRUB2O95900 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.43■□□□□ 0.7
TRUB2O95900 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.43■□□□□ 0.7
TRUB2O95900 AC034236.2-201ENST00000606662 1610 ntBASIC19.43■□□□□ 0.7
TRUB2O95900 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.43■□□□□ 0.7
TRUB2O95900 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRUB2O95900 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB2O95900 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB2O95900 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.42■□□□□ 0.7
TRUB2O95900 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRUB2O95900 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRUB2O95900 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB2O95900 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRUB2O95900 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB2O95900 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB2O95900 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.42■□□□□ 0.7
TRUB2O95900 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.42■□□□□ 0.7
TRUB2O95900 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB2O95900 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB2O95900 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.42■□□□□ 0.7
TRUB2O95900 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB2O95900 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
TRUB2O95900 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB2O95900 AC139887.4-201ENST00000607877 719 ntBASIC19.42■□□□□ 0.7
TRUB2O95900 AC006011.2-201ENST00000621313 1158 ntBASIC19.42■□□□□ 0.7
TRUB2O95900 MYC-208ENST00000641036 567 ntBASIC19.42■□□□□ 0.7
TRUB2O95900 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRUB2O95900 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB2O95900 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRUB2O95900 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRUB2O95900 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.42■□□□□ 0.7
TRUB2O95900 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB2O95900 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRUB2O95900 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB2O95900 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB2O95900 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB2O95900 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
TRUB2O95900 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB2O95900 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.41■□□□□ 0.7
TRUB2O95900 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB2O95900 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.41■□□□□ 0.7
TRUB2O95900 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.41■□□□□ 0.7
TRUB2O95900 AP000523.1-201ENST00000398242 1049 ntBASIC19.41■□□□□ 0.7
TRUB2O95900 AC117947.1-201ENST00000427448 529 ntBASIC19.41■□□□□ 0.7
TRUB2O95900 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.41■□□□□ 0.7
TRUB2O95900 AC104076.2-201ENST00000448912 469 ntBASIC19.41■□□□□ 0.7
TRUB2O95900 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.41■□□□□ 0.7
TRUB2O95900 KRT18P41-201ENST00000518924 1277 ntBASIC19.41■□□□□ 0.7
TRUB2O95900 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TRUB2O95900 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.41■□□□□ 0.7
TRUB2O95900 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.41■□□□□ 0.7
TRUB2O95900 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB2O95900 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB2O95900 AL023973.1-201ENST00000624619 620 ntBASIC19.41■□□□□ 0.7
TRUB2O95900 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.41■□□□□ 0.7
TRUB2O95900 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB2O95900 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB2O95900 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB2O95900 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB2O95900 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRUB2O95900 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.41■□□□□ 0.7
TRUB2O95900 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRUB2O95900 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRUB2O95900 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.4■□□□□ 0.7
TRUB2O95900 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRUB2O95900 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRUB2O95900 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms