Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC28.86■■■□□ 2.21
PCF11O94913 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
PCF11O94913 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
PCF11O94913 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PCF11O94913 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
PCF11O94913 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC28.85■■■□□ 2.21
PCF11O94913 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCF11O94913 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
PCF11O94913 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCF11O94913 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCF11O94913 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC28.85■■■□□ 2.21
PCF11O94913 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC28.85■■■□□ 2.21
PCF11O94913 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC28.85■■■□□ 2.21
PCF11O94913 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC28.85■■■□□ 2.21
PCF11O94913 AC009102.3-201ENST00000623118 1491 ntBASIC28.85■■■□□ 2.21
PCF11O94913 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
PCF11O94913 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC28.85■■■□□ 2.21
PCF11O94913 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC28.85■■■□□ 2.21
PCF11O94913 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PCF11O94913 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
PCF11O94913 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
PCF11O94913 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC28.85■■■□□ 2.21
PCF11O94913 AC116562.4-201ENST00000641316 2276 ntBASIC28.85■■■□□ 2.21
PCF11O94913 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC28.85■■■□□ 2.21
PCF11O94913 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC28.84■■■□□ 2.21
PCF11O94913 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
PCF11O94913 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PCF11O94913 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PCF11O94913 HOTTIP_1.1-201ENST00000620415 57 ntBASIC28.84■■■□□ 2.21
PCF11O94913 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC28.84■■■□□ 2.21
PCF11O94913 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PCF11O94913 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
PCF11O94913 FAM220CP-201ENST00000395253 831 ntBASIC28.84■■■□□ 2.21
PCF11O94913 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
PCF11O94913 AP002469.2-201ENST00000531724 424 ntBASIC28.84■■■□□ 2.21
PCF11O94913 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PCF11O94913 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
PCF11O94913 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC28.83■■■□□ 2.21
PCF11O94913 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PCF11O94913 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
PCF11O94913 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
PCF11O94913 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PCF11O94913 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC28.83■■■□□ 2.21
PCF11O94913 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC28.83■■■□□ 2.21
PCF11O94913 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PCF11O94913 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC28.83■■■□□ 2.21
PCF11O94913 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC28.83■■■□□ 2.21
PCF11O94913 REXO1L6P-202ENST00000619970 1078 ntBASIC28.83■■■□□ 2.21
PCF11O94913 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
PCF11O94913 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PCF11O94913 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PCF11O94913 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
PCF11O94913 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC28.82■■■□□ 2.2
PCF11O94913 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC28.82■■■□□ 2.2
PCF11O94913 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC28.82■■■□□ 2.2
PCF11O94913 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC28.82■■■□□ 2.2
PCF11O94913 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC28.82■■■□□ 2.2
PCF11O94913 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
PCF11O94913 SDHAP2-201ENST00000455183 2001 ntBASIC28.82■■■□□ 2.2
PCF11O94913 AC099343.3-201ENST00000605834 2503 ntBASIC28.82■■■□□ 2.2
PCF11O94913 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PCF11O94913 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC28.81■■■□□ 2.2
PCF11O94913 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC28.81■■■□□ 2.2
PCF11O94913 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC28.81■■■□□ 2.2
PCF11O94913 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC28.81■■■□□ 2.2
PCF11O94913 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC28.81■■■□□ 2.2
PCF11O94913 VENTXP7-201ENST00000475503 772 ntBASIC28.81■■■□□ 2.2
PCF11O94913 FICD-205ENST00000552758 603 ntTSL 2 BASIC28.81■■■□□ 2.2
PCF11O94913 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PCF11O94913 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC28.81■■■□□ 2.2
PCF11O94913 AL121772.3-201ENST00000610840 674 ntBASIC28.81■■■□□ 2.2
PCF11O94913 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PCF11O94913 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC28.81■■■□□ 2.2
PCF11O94913 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
PCF11O94913 AC022898.2-201ENST00000616822 1312 ntBASIC28.81■■■□□ 2.2
PCF11O94913 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC28.81■■■□□ 2.2
PCF11O94913 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCF11O94913 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC28.8■■■□□ 2.2
PCF11O94913 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC28.8■■■□□ 2.2
PCF11O94913 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCF11O94913 DDT-203ENST00000403754 569 ntTSL 3 BASIC28.8■■■□□ 2.2
PCF11O94913 DDT-206ENST00000430101 573 ntTSL 2 BASIC28.8■■■□□ 2.2
PCF11O94913 SAPCD2P3-201ENST00000455031 850 ntBASIC28.8■■■□□ 2.2
PCF11O94913 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PCF11O94913 ABR-217ENST00000572441 563 ntTSL 4 BASIC28.8■■■□□ 2.2
PCF11O94913 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC28.8■■■□□ 2.2
PCF11O94913 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCF11O94913 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
PCF11O94913 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCF11O94913 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCF11O94913 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCF11O94913 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCF11O94913 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PCF11O94913 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PCF11O94913 MRPL3P1-201ENST00000400109 1033 ntBASIC28.79■■■□□ 2.2
PCF11O94913 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
PCF11O94913 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
PCF11O94913 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
PCF11O94913 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
PCF11O94913 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms