Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNND1O60716 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNND1O60716 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTNND1O60716 NSUN5P1-202ENST00000421140 1535 ntBASIC21.65■■□□□ 1.06
CTNND1O60716 NSUN5P2-203ENST00000457352 1529 ntBASIC21.65■■□□□ 1.06
CTNND1O60716 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNND1O60716 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTNND1O60716 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CTNND1O60716 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTNND1O60716 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CTNND1O60716 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTNND1O60716 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.64■■□□□ 1.06
CTNND1O60716 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.64■■□□□ 1.05
CTNND1O60716 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CTNND1O60716 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTNND1O60716 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTNND1O60716 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CTNND1O60716 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTNND1O60716 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTNND1O60716 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.64■■□□□ 1.05
CTNND1O60716 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.64■■□□□ 1.05
CTNND1O60716 AL662844.1-201ENST00000546340 181 ntBASIC21.64■■□□□ 1.05
CTNND1O60716 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.64■■□□□ 1.05
CTNND1O60716 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.64■■□□□ 1.05
CTNND1O60716 AP005901.3-202ENST00000581653 237 ntBASIC21.64■■□□□ 1.05
CTNND1O60716 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTNND1O60716 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.64■■□□□ 1.05
CTNND1O60716 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTNND1O60716 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTNND1O60716 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTNND1O60716 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.64■■□□□ 1.05
CTNND1O60716 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNND1O60716 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.63■■□□□ 1.05
CTNND1O60716 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNND1O60716 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNND1O60716 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CTNND1O60716 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNND1O60716 AP000593.1-201ENST00000393668 712 ntBASIC21.63■■□□□ 1.05
CTNND1O60716 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.63■■□□□ 1.05
CTNND1O60716 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.63■■□□□ 1.05
CTNND1O60716 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.63■■□□□ 1.05
CTNND1O60716 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.63■■□□□ 1.05
CTNND1O60716 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.63■■□□□ 1.05
CTNND1O60716 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNND1O60716 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNND1O60716 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNND1O60716 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNND1O60716 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CTNND1O60716 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNND1O60716 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNND1O60716 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.63■■□□□ 1.05
CTNND1O60716 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNND1O60716 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTNND1O60716 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.63■■□□□ 1.05
CTNND1O60716 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.63■■□□□ 1.05
CTNND1O60716 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTNND1O60716 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CTNND1O60716 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTNND1O60716 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTNND1O60716 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.62■■□□□ 1.05
CTNND1O60716 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTNND1O60716 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.62■■□□□ 1.05
CTNND1O60716 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.62■■□□□ 1.05
CTNND1O60716 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.62■■□□□ 1.05
CTNND1O60716 AC011840.4-201ENST00000578471 627 ntBASIC21.62■■□□□ 1.05
CTNND1O60716 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CTNND1O60716 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
CTNND1O60716 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.62■■□□□ 1.05
CTNND1O60716 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTNND1O60716 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CTNND1O60716 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.62■■□□□ 1.05
CTNND1O60716 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.62■■□□□ 1.05
CTNND1O60716 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTNND1O60716 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTNND1O60716 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CTNND1O60716 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTNND1O60716 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTNND1O60716 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTNND1O60716 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 MTMR9LP-203ENST00000426597 1545 ntBASIC21.61■■□□□ 1.05
CTNND1O60716 AL163051.1-201ENST00000569214 1512 ntBASIC21.61■■□□□ 1.05
CTNND1O60716 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CTNND1O60716 AC091607.1-201ENST00000490318 1060 ntBASIC21.61■■□□□ 1.05
CTNND1O60716 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.61■■□□□ 1.05
CTNND1O60716 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.61■■□□□ 1.05
CTNND1O60716 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CTNND1O60716 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTNND1O60716 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms