Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RIPK2O43353 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIPK2O43353 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RIPK2O43353 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIPK2O43353 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIPK2O43353 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RIPK2O43353 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIPK2O43353 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.85■□□□□ 0.61
RIPK2O43353 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RIPK2O43353 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RIPK2O43353 AC138932.1-201ENST00000534164 6830 ntBASIC18.85■□□□□ 0.61
RIPK2O43353 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RIPK2O43353 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RIPK2O43353 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RIPK2O43353 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RIPK2O43353 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.85■□□□□ 0.61
RIPK2O43353 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RIPK2O43353 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RIPK2O43353 POM121L13P-201ENST00000422362 380 ntBASIC18.85■□□□□ 0.61
RIPK2O43353 UNC93B4-201ENST00000505679 747 ntBASIC18.85■□□□□ 0.61
RIPK2O43353 PRSS44-201ENST00000515154 1146 ntBASIC18.85■□□□□ 0.61
RIPK2O43353 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RIPK2O43353 AC098934.4-201ENST00000564127 592 ntBASIC18.85■□□□□ 0.61
RIPK2O43353 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.85■□□□□ 0.61
RIPK2O43353 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.85■□□□□ 0.61
RIPK2O43353 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RIPK2O43353 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RIPK2O43353 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RIPK2O43353 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RIPK2O43353 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RIPK2O43353 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
RIPK2O43353 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RIPK2O43353 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RIPK2O43353 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.85■□□□□ 0.61
RIPK2O43353 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RIPK2O43353 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
RIPK2O43353 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.84■□□□□ 0.61
RIPK2O43353 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 HTR7P1-201ENST00000538670 1336 ntBASIC18.84■□□□□ 0.61
RIPK2O43353 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 PCDHA12-202ENST00000613593 2588 ntBASIC18.84■□□□□ 0.61
RIPK2O43353 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RIPK2O43353 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.84■□□□□ 0.61
RIPK2O43353 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.84■□□□□ 0.61
RIPK2O43353 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.84■□□□□ 0.61
RIPK2O43353 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 RCC2P3-201ENST00000418112 1537 ntBASIC18.84■□□□□ 0.61
RIPK2O43353 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.84■□□□□ 0.61
RIPK2O43353 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIPK2O43353 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RIPK2O43353 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
RIPK2O43353 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RIPK2O43353 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RIPK2O43353 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RIPK2O43353 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RIPK2O43353 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.83■□□□□ 0.61
RIPK2O43353 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RIPK2O43353 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RIPK2O43353 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.83■□□□□ 0.61
RIPK2O43353 AL096828.2-201ENST00000567259 1965 ntBASIC18.83■□□□□ 0.61
RIPK2O43353 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RIPK2O43353 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RIPK2O43353 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RIPK2O43353 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
RIPK2O43353 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.83■□□□□ 0.6
RIPK2O43353 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.83■□□□□ 0.6
RIPK2O43353 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RIPK2O43353 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.83■□□□□ 0.6
RIPK2O43353 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.83■□□□□ 0.6
RIPK2O43353 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.83■□□□□ 0.6
RIPK2O43353 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RIPK2O43353 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RIPK2O43353 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RIPK2O43353 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RIPK2O43353 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.83■□□□□ 0.6
RIPK2O43353 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RIPK2O43353 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RIPK2O43353 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.83■□□□□ 0.6
RIPK2O43353 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.83■□□□□ 0.6
RIPK2O43353 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RIPK2O43353 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms