Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ITM2C-210ENST00000620962 501 ntBASIC18.48■□□□□ 0.55
PHGDHO43175 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.48■□□□□ 0.55
PHGDHO43175 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.48■□□□□ 0.55
PHGDHO43175 MYC-208ENST00000641036 567 ntBASIC18.48■□□□□ 0.55
PHGDHO43175 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PHGDHO43175 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PHGDHO43175 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.48■□□□□ 0.55
PHGDHO43175 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PHGDHO43175 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PHGDHO43175 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PHGDHO43175 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PHGDHO43175 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PHGDHO43175 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.48■□□□□ 0.55
PHGDHO43175 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PHGDHO43175 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PHGDHO43175 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.47■□□□□ 0.55
PHGDHO43175 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PHGDHO43175 PCDHB18P-201ENST00000524813 2368 ntBASIC18.47■□□□□ 0.55
PHGDHO43175 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.47■□□□□ 0.55
PHGDHO43175 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PHGDHO43175 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PHGDHO43175 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PHGDHO43175 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PHGDHO43175 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PHGDHO43175 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PHGDHO43175 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PHGDHO43175 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
PHGDHO43175 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.47■□□□□ 0.55
PHGDHO43175 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PHGDHO43175 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.47■□□□□ 0.55
PHGDHO43175 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.47■□□□□ 0.55
PHGDHO43175 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.47■□□□□ 0.55
PHGDHO43175 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.47■□□□□ 0.55
PHGDHO43175 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.47■□□□□ 0.55
PHGDHO43175 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.47■□□□□ 0.55
PHGDHO43175 AP000692.2-201ENST00000608391 879 ntBASIC18.47■□□□□ 0.55
PHGDHO43175 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.47■□□□□ 0.55
PHGDHO43175 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PHGDHO43175 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.47■□□□□ 0.55
PHGDHO43175 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PHGDHO43175 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.46■□□□□ 0.55
PHGDHO43175 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 FSCN1P1-201ENST00000568912 1481 ntBASIC18.46■□□□□ 0.55
PHGDHO43175 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.46■□□□□ 0.55
PHGDHO43175 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.46■□□□□ 0.55
PHGDHO43175 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.46■□□□□ 0.55
PHGDHO43175 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.46■□□□□ 0.55
PHGDHO43175 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.46■□□□□ 0.55
PHGDHO43175 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.46■□□□□ 0.55
PHGDHO43175 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PHGDHO43175 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.46■□□□□ 0.55
PHGDHO43175 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.46■□□□□ 0.55
PHGDHO43175 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.46■□□□□ 0.55
PHGDHO43175 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.46■□□□□ 0.55
PHGDHO43175 CD177P1-201ENST00000606252 935 ntBASIC18.46■□□□□ 0.55
PHGDHO43175 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PHGDHO43175 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PHGDHO43175 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
PHGDHO43175 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
PHGDHO43175 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PHGDHO43175 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PHGDHO43175 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.45■□□□□ 0.54
PHGDHO43175 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PHGDHO43175 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.45■□□□□ 0.54
PHGDHO43175 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 PRORSD1P-201ENST00000295112 541 ntBASIC18.45■□□□□ 0.54
PHGDHO43175 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.45■□□□□ 0.54
PHGDHO43175 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.45■□□□□ 0.54
PHGDHO43175 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PHGDHO43175 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.45■□□□□ 0.54
PHGDHO43175 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PHGDHO43175 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.45■□□□□ 0.54
PHGDHO43175 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.45■□□□□ 0.54
PHGDHO43175 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PHGDHO43175 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms