Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.15■□□□□ 0.34
LAMA5O15230 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
LAMA5O15230 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.15■□□□□ 0.34
LAMA5O15230 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.15■□□□□ 0.34
LAMA5O15230 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.15■□□□□ 0.34
LAMA5O15230 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
LAMA5O15230 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.15■□□□□ 0.34
LAMA5O15230 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 KRT18P27-201ENST00000427733 1299 ntBASIC17.15■□□□□ 0.34
LAMA5O15230 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.15■□□□□ 0.34
LAMA5O15230 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.15■□□□□ 0.34
LAMA5O15230 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.15■□□□□ 0.34
LAMA5O15230 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.15■□□□□ 0.34
LAMA5O15230 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
LAMA5O15230 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.15■□□□□ 0.34
LAMA5O15230 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.15■□□□□ 0.34
LAMA5O15230 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.15■□□□□ 0.34
LAMA5O15230 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.15■□□□□ 0.34
LAMA5O15230 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LAMA5O15230 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
LAMA5O15230 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
LAMA5O15230 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LAMA5O15230 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
LAMA5O15230 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
LAMA5O15230 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.14■□□□□ 0.33
LAMA5O15230 RBM17P3-201ENST00000417687 1192 ntBASIC17.14■□□□□ 0.33
LAMA5O15230 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.14■□□□□ 0.33
LAMA5O15230 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
LAMA5O15230 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.14■□□□□ 0.33
LAMA5O15230 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LAMA5O15230 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.14■□□□□ 0.33
LAMA5O15230 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LAMA5O15230 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.14■□□□□ 0.33
LAMA5O15230 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LAMA5O15230 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LAMA5O15230 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LAMA5O15230 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LAMA5O15230 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.14■□□□□ 0.33
LAMA5O15230 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.14■□□□□ 0.33
LAMA5O15230 AC138761.1-201ENST00000584393 385 ntBASIC17.14■□□□□ 0.33
LAMA5O15230 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.14■□□□□ 0.33
LAMA5O15230 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.14■□□□□ 0.33
LAMA5O15230 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LAMA5O15230 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.14■□□□□ 0.33
LAMA5O15230 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LAMA5O15230 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.14■□□□□ 0.33
LAMA5O15230 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LAMA5O15230 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.14■□□□□ 0.33
LAMA5O15230 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
LAMA5O15230 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.14■□□□□ 0.33
LAMA5O15230 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.14■□□□□ 0.33
LAMA5O15230 AC024563.2-201ENST00000603282 481 ntBASIC17.14■□□□□ 0.33
LAMA5O15230 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LAMA5O15230 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LAMA5O15230 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LAMA5O15230 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LAMA5O15230 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
LAMA5O15230 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.13■□□□□ 0.33
LAMA5O15230 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LAMA5O15230 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
LAMA5O15230 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.13■□□□□ 0.33
LAMA5O15230 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.13■□□□□ 0.33
LAMA5O15230 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LAMA5O15230 INTS4P1-201ENST00000438455 1935 ntBASIC17.13■□□□□ 0.33
LAMA5O15230 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.13■□□□□ 0.33
LAMA5O15230 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LAMA5O15230 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LAMA5O15230 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.13■□□□□ 0.33
LAMA5O15230 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.13■□□□□ 0.33
LAMA5O15230 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.13■□□□□ 0.33
LAMA5O15230 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.13■□□□□ 0.33
LAMA5O15230 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LAMA5O15230 TP73-AS1-210ENST00000637775 1455 ntBASIC17.13■□□□□ 0.33
LAMA5O15230 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.13■□□□□ 0.33
LAMA5O15230 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LAMA5O15230 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LAMA5O15230 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LAMA5O15230 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LAMA5O15230 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LAMA5O15230 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.12■□□□□ 0.33
LAMA5O15230 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LAMA5O15230 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LAMA5O15230 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LAMA5O15230 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.12■□□□□ 0.33
LAMA5O15230 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms