Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RTCAO00442 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.7■□□□□ 0.42
RTCAO00442 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RTCAO00442 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
RTCAO00442 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.69■□□□□ 0.42
RTCAO00442 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.69■□□□□ 0.42
RTCAO00442 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTCAO00442 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RTCAO00442 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTCAO00442 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.69■□□□□ 0.42
RTCAO00442 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTCAO00442 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTCAO00442 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.69■□□□□ 0.42
RTCAO00442 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RTCAO00442 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTCAO00442 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.69■□□□□ 0.42
RTCAO00442 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.69■□□□□ 0.42
RTCAO00442 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.69■□□□□ 0.42
RTCAO00442 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RTCAO00442 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.69■□□□□ 0.42
RTCAO00442 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTCAO00442 AC073912.3-201ENST00000624414 853 ntBASIC17.69■□□□□ 0.42
RTCAO00442 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.69■□□□□ 0.42
RTCAO00442 AC112777.1-201ENST00000540175 1423 ntBASIC17.69■□□□□ 0.42
RTCAO00442 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
RTCAO00442 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTCAO00442 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTCAO00442 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RTCAO00442 AC034236.2-201ENST00000606662 1610 ntBASIC17.69■□□□□ 0.42
RTCAO00442 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RTCAO00442 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RTCAO00442 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RTCAO00442 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RTCAO00442 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.68■□□□□ 0.42
RTCAO00442 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RTCAO00442 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.68■□□□□ 0.42
RTCAO00442 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.68■□□□□ 0.42
RTCAO00442 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.68■□□□□ 0.42
RTCAO00442 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.68■□□□□ 0.42
RTCAO00442 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.68■□□□□ 0.42
RTCAO00442 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.68■□□□□ 0.42
RTCAO00442 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
RTCAO00442 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.68■□□□□ 0.42
RTCAO00442 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.68■□□□□ 0.42
RTCAO00442 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.68■□□□□ 0.42
RTCAO00442 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.68■□□□□ 0.42
RTCAO00442 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTCAO00442 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.68■□□□□ 0.42
RTCAO00442 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.68■□□□□ 0.42
RTCAO00442 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.68■□□□□ 0.42
RTCAO00442 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.67■□□□□ 0.42
RTCAO00442 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.67■□□□□ 0.42
RTCAO00442 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RTCAO00442 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.67■□□□□ 0.42
RTCAO00442 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.67■□□□□ 0.42
RTCAO00442 WWOX-216ENST00000569818 525 ntBASIC17.67■□□□□ 0.42
RTCAO00442 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RTCAO00442 AC145285.6-201ENST00000604632 637 ntBASIC17.67■□□□□ 0.42
RTCAO00442 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.67■□□□□ 0.42
RTCAO00442 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.67■□□□□ 0.42
RTCAO00442 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.67■□□□□ 0.42
RTCAO00442 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 AC073592.3-201ENST00000625118 1834 ntBASIC17.67■□□□□ 0.42
RTCAO00442 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.67■□□□□ 0.42
RTCAO00442 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RTCAO00442 KRT18P22-201ENST00000402024 1347 ntBASIC17.67■□□□□ 0.42
RTCAO00442 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms