Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 AL138831.2-201ENST00000606564 490 ntBASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TMEM88BA6NKF7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 AC068472.1-201ENST00000474589 881 ntBASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 AC138761.1-201ENST00000584393 385 ntBASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TMEM88BA6NKF7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 AC097374.2-201ENST00000618617 1306 ntBASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TMEM88BA6NKF7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 KRT8P32-201ENST00000512863 1461 ntBASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TMEM88BA6NKF7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 AC026310.3-201ENST00000625186 2373 ntBASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 AC093028.1-201ENST00000622998 982 ntBASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 AC005593.1-201ENST00000624894 515 ntBASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.47■■□□□ 1.03
TMEM88BA6NKF7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.46■■□□□ 1.03
TMEM88BA6NKF7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms