Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 NOC2LP2-201ENST00000407594 1944 ntBASIC20.47■□□□□ 0.87
TRIM49BA6NDI0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 MIR564-202ENST00000385049 94 ntBASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 AC008550.1-201ENST00000511500 884 ntBASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM49BA6NDI0 AC067852.2-201ENST00000590513 2313 ntBASIC20.45■□□□□ 0.87
TRIM49BA6NDI0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 AC093677.2-201ENST00000600169 1863 ntBASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 RBM17P1-201ENST00000453646 1190 ntBASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 KRT18P41-201ENST00000518924 1277 ntBASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM49BA6NDI0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 AC036111.1-201ENST00000533973 1582 ntBASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 AL390955.1-201ENST00000428694 934 ntBASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM49BA6NDI0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM49BA6NDI0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms