Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 AC087633.2-202ENST00000565166 1439 ntBASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 HLA-G-202ENST00000376815 851 ntBASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 HLA-G-203ENST00000376818 1127 ntBASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 AC011298.3-201ENST00000615796 283 ntBASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 AC105233.4-201ENST00000642045 216 ntBASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 AC105265.2-201ENST00000467189 838 ntBASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 AL358852.1-201ENST00000623174 1268 ntBASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAPPC1Q9Y5R8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.08□□□□□ -0.15
TRAPPC1Q9Y5R8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAPPC1Q9Y5R8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAPPC1Q9Y5R8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAPPC1Q9Y5R8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRAPPC1Q9Y5R8 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAPPC1Q9Y5R8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAPPC1Q9Y5R8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 PCDHB19P-201ENST00000570871 2371 ntBASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 AC097381.1-201ENST00000429019 1296 ntBASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAPPC1Q9Y5R8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms