Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 ANO7L1-203ENST00000602586 1720 ntBASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDHGB3Q9Y5G1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 ECEL1P3-201ENST00000427961 737 ntBASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 AC116562.2-201ENST00000507042 360 ntBASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 AC012306.2-201ENST00000609350 630 ntBASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 AC083906.6-201ENST00000641366 219 ntBASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGB3Q9Y5G1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.64■□□□□ 0.42
PCDHGB3Q9Y5G1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.64■□□□□ 0.42
PCDHGB3Q9Y5G1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGB3Q9Y5G1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGB3Q9Y5G1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGB3Q9Y5G1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 MMP23A-201ENST00000234610 1017 ntBASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 UNC93B2-201ENST00000285383 730 ntBASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 RCC2P6-201ENST00000526625 1557 ntBASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGB3Q9Y5G1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGB3Q9Y5G1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms