Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ABALON-201ENST00000629058 1903 ntBASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.25■□□□□ 0.99
R3HCC1Q9Y3T6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 AC133681.1-201ENST00000465482 601 ntBASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 AC098590.1-201ENST00000468126 897 ntBASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
R3HCC1Q9Y3T6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
R3HCC1Q9Y3T6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 ESPNP-201ENST00000270691 2015 ntBASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
R3HCC1Q9Y3T6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms