Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC004264.1-201ENST00000608354 794 ntBASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.96□□□□□ -0.33
UBE2D4Q9Y2X8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2D4Q9Y2X8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.96□□□□□ -0.34
UBE2D4Q9Y2X8 NBPF21P-201ENST00000425093 1451 ntBASIC12.96□□□□□ -0.34
UBE2D4Q9Y2X8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2D4Q9Y2X8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC12.96□□□□□ -0.34
UBE2D4Q9Y2X8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
UBE2D4Q9Y2X8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2D4Q9Y2X8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2D4Q9Y2X8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
UBE2D4Q9Y2X8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2D4Q9Y2X8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 AL357033.4-201ENST00000617703 1807 ntBASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 TSPY6P-201ENST00000448518 926 ntBASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 IKBKGP1-201ENST00000612193 1073 ntBASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2D4Q9Y2X8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 POU5F1P3-201ENST00000428824 1078 ntBASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 AL137784.2-201ENST00000607332 1000 ntBASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 AC083880.1-201ENST00000608266 535 ntBASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 KRT8P3-201ENST00000519669 1449 ntBASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2D4Q9Y2X8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms