Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 AC138907.5-202ENST00000569484 235 ntBASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 AL023806.1-201ENST00000603994 1649 ntBASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRCH1Q9Y2L9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 AP001160.3-201ENST00000601484 763 ntBASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 UBALD1-205ENST00000590891 2641 ntBASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LRCH1Q9Y2L9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 PKD1P1-201ENST00000458669 6805 ntBASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 AC010141.2-201ENST00000452426 721 ntBASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 AC090192.1-201ENST00000517740 490 ntBASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 AC093677.2-201ENST00000600169 1863 ntBASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRCH1Q9Y2L9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.64■□□□□ 0.42
LRCH1Q9Y2L9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH1Q9Y2L9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRCH1Q9Y2L9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.64■□□□□ 0.41
LRCH1Q9Y2L9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.64■□□□□ 0.41
LRCH1Q9Y2L9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LRCH1Q9Y2L9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms